| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0400 |
|---|
| Symbol | |
|---|
| ID | 6144974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 412563 |
|---|
| End bp | 413420 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641615295 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001742502 |
|---|
| Protein GI | 170682512 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTCCT GGAAAAAGAA ACTTGTAGTA TCACAATTAG CATTGGCTTG CACTCTGGCT
ATCACCTCTC AGGCTAATGC AACTACTTAT GACACCTGGA CATATGTCGA TAACGCGGCT
ACTGGTCTTA ACTGGACCAA TATGGATAAT CCGGGCACTG TAGACGGTAA CTATGTGAAT
TATAGTGGCT TTGTCTACTA TAACAACACC AATGGCGACT TCGATCAGTC TTTTAACGGT
GATACTGTTA ACGGCACGAT TTCTACATAT TATCTGAACC ACGACTACAC TGATGGTACA
AATGGCAATG CTAACCAGCT TGATATTGCT AATTCAGTAA TTCACGGCTC AATCACTTCT
ATGCTGCCTG GTGGTGATCT CTGGCATAAT AATGCTTATG ATCAAAGCTA TGGCTACATT
CAGGCTGGTG ATACAGTTAT TGATACAACG TGGTATGACG GTGATGTATT CACTCTGAAT
ATTGCTAACT CCACTATTGA TGATGACTAT GAAGCACTTT ACTTTACTGA TTACTACAAA
GATGGCGATG TAACTAAATC TACTAACGGC ACTTTTGACG TTAGCGAAGG CGTTGCTGTT
AATCTTAATG TAGAAAGTAA CATCAATATC TCCAATAACT CCCGTGTTGC AGGTATTGCG
TTATCTCAAG GTAGTACTTA CAACAATGGA TTTGCCCCTA TATTTCCAGA CACCTGTTAT
CACTTAACCC ATTACTGGCC TGCTGCCGCA GATATTCCCG TGGCGAGCGA TAACCCAGTG
CACTATGCGG ATGCCATTCG TTATAATGCT CGAACGCCTC TGCAAGGTTC TTTGCTGCCG
TTAACCCGTC TGGTTTAG
|
|---|
| Protein sequence | MHSWKKKLVV SQLALACTLA ITSQANATTY DTWTYVDNAA TGLNWTNMDN PGTVDGNYVN
YSGFVYYNNT NGDFDQSFNG DTVNGTISTY YLNHDYTDGT NGNANQLDIA NSVIHGSITS
MLPGGDLWHN NAYDQSYGYI QAGDTVIDTT WYDGDVFTLN IANSTIDDDY EALYFTDYYK
DGDVTKSTNG TFDVSEGVAV NLNVESNINI SNNSRVAGIA LSQGSTYNNG FAPIFPDTCY
HLTHYWPAAA DIPVASDNPV HYADAIRYNA RTPLQGSLLP LTRLV
|
|---|
| |