Gene EcSMS35_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0340 
Symbol 
ID6146031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp349578 
End bp350273 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID641615236 
Producthypothetical protein 
Protein accessionYP_001742444 
Protein GI170679990 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATC GGAGCGAATT TTTGAATAAC GTTGCTCAGG CACTGGGTCG CCCGCAGCGA 
CTTGAACCGC AAGCAGAAGA TGCGCCGCTT AACAACTATG CTAACGAGCG GCTTACCGAA
CTTAACCAAC AGCAGCGCTG TGACGCGTTT ATCCAGTTTG CCAGCGATGT TATGTTGACG
CGCTGTGAAC TGACCAGCGA GGCGCAGGCC GCAGAAGCTG CAATACGTCT GTGTAAAGAG
CTGGGAGATC AGTCGATCGT GATTAGCGGT GACACGAGGC TGGAGGAATT GGGGATTAGC
GAACGTTTGC AGCAGGAATG CAATGCCGTT GTTTGGGATC CGGCGAAAGG TATTGAGAAC
ATATCACAAG CAGAGCAGGC TAAAGTGGGC GTCGTATATG CTGAATATGG TTTAACCGAA
TCGGGAGGCG TGGTTCTTTT TTCCGCCGCC GGGCGCGGGC GTTCATTGAG CCTGCTCCCG
GAATCTTCTC TTTTTATCCT GCGTAAAAGC ACTATCCTGC CGCGTGTAGC GCAACTCGCA
GAAAAATTGC ATCAGAAAGC GCAGGCCGGT GAACGAATGC CTTCCTGCAT TAACATCATT
AGCGGCCCCA GTTCAACGGC GGATATTGAG CTTATCAAAG TCGTCGGAGT TCATGGCCCG
GTGAAAGCGG TGTATCTGAT TATTGAGGAT TGTTGA
 
Protein sequence
MDNRSEFLNN VAQALGRPQR LEPQAEDAPL NNYANERLTE LNQQQRCDAF IQFASDVMLT 
RCELTSEAQA AEAAIRLCKE LGDQSIVISG DTRLEELGIS ERLQQECNAV VWDPAKGIEN
ISQAEQAKVG VVYAEYGLTE SGGVVLFSAA GRGRSLSLLP ESSLFILRKS TILPRVAQLA
EKLHQKAQAG ERMPSCINII SGPSSTADIE LIKVVGVHGP VKAVYLIIED C