Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0340 |
Symbol | |
ID | 6146031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 349578 |
End bp | 350273 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641615236 |
Product | hypothetical protein |
Protein accession | YP_001742444 |
Protein GI | 170679990 |
COG category | [S] Function unknown |
COG ID | [COG1556] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAATC GGAGCGAATT TTTGAATAAC GTTGCTCAGG CACTGGGTCG CCCGCAGCGA CTTGAACCGC AAGCAGAAGA TGCGCCGCTT AACAACTATG CTAACGAGCG GCTTACCGAA CTTAACCAAC AGCAGCGCTG TGACGCGTTT ATCCAGTTTG CCAGCGATGT TATGTTGACG CGCTGTGAAC TGACCAGCGA GGCGCAGGCC GCAGAAGCTG CAATACGTCT GTGTAAAGAG CTGGGAGATC AGTCGATCGT GATTAGCGGT GACACGAGGC TGGAGGAATT GGGGATTAGC GAACGTTTGC AGCAGGAATG CAATGCCGTT GTTTGGGATC CGGCGAAAGG TATTGAGAAC ATATCACAAG CAGAGCAGGC TAAAGTGGGC GTCGTATATG CTGAATATGG TTTAACCGAA TCGGGAGGCG TGGTTCTTTT TTCCGCCGCC GGGCGCGGGC GTTCATTGAG CCTGCTCCCG GAATCTTCTC TTTTTATCCT GCGTAAAAGC ACTATCCTGC CGCGTGTAGC GCAACTCGCA GAAAAATTGC ATCAGAAAGC GCAGGCCGGT GAACGAATGC CTTCCTGCAT TAACATCATT AGCGGCCCCA GTTCAACGGC GGATATTGAG CTTATCAAAG TCGTCGGAGT TCATGGCCCG GTGAAAGCGG TGTATCTGAT TATTGAGGAT TGTTGA
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Protein sequence | MDNRSEFLNN VAQALGRPQR LEPQAEDAPL NNYANERLTE LNQQQRCDAF IQFASDVMLT RCELTSEAQA AEAAIRLCKE LGDQSIVISG DTRLEELGIS ERLQQECNAV VWDPAKGIEN ISQAEQAKVG VVYAEYGLTE SGGVVLFSAA GRGRSLSLLP ESSLFILRKS TILPRVAQLA EKLHQKAQAG ERMPSCINII SGPSSTADIE LIKVVGVHGP VKAVYLIIED C
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