Gene EcSMS35_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0143 
Symbol 
ID6146608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp158010 
End bp158225 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content45% 
IMG OID641615044 
Producthypothetical protein 
Protein accessionYP_001742260 
Protein GI170681773 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAA AGACACGGAG AGAAACCTGG CAGACGTTGG CGCAGTGGTT TGAAGAGAAG 
GGATTTCAGA AGGGATTTCA GAAGGGATAT AAAGAGGGAC TCCAGAAGGT AAGACTGGCC
CAGCGTCTTC TGAGTAAAGG AATGTCTCGG GAAGACGTTG CAGAGGTGAC AGCTTTATCT
CTTGCAGAGA TTGATAAGCT AATTAACTCT AACTAA
 
Protein sequence
MEIKTRRETW QTLAQWFEEK GFQKGFQKGY KEGLQKVRLA QRLLSKGMSR EDVAEVTALS 
LAEIDKLINS N