Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0152 |
Symbol | tetR |
ID | 6106470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | - |
Start bp | 119806 |
End bp | 120483 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641614891 |
Product | tetracycline repressor protein, class A |
Protein accession | YP_001740032 |
Protein GI | 170650887 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTATCA GTGATAAAGT GTCAAGCATG ACAAAGTTGC AGCCGAATAC AGTGATCCGT GCCGCCCTGG ACCTGTTGAA CGAGGTCGGC GTAGACGGTC TGACGACACG CAAACTGGCG GAACGGTTGG GGGTTCAGCA GCCGGCGCTT TACTGGCACT TCAGGAACAA GCGGGCGCTG CTCGACGCAC TGGCCGAAGC CATGCTGGCG GAGAATCATA CGCATTCGGT GCCGAGAGCC GACGACGACT GGCGCTCATT TCTGATCGGG AATGCCCGCA GCTTCAGGCA GGCGCTGCTC GCCTACCGCG ATGGCGCGCG CATCCATGCC GGCACGCGAC CGGGCGCACC GCAGATGGAA ACGGCCGACG CGCAGCTTCG CTTCCTCTGC GAGGCGGGTT TTTCGGCCGG GGACGCCGTC AATGCGCTGA TGACAATCAG CTACTTCACT GTTGGGGCCG TGCTTGAGGA GCAGGCCGGC GACAGCGATG CCGGCGAGCG CGGCGGCACC GTTGAACAGG CTCCGCTCTC GCCGCTGTTG CGGGCCGCGA TAGACGCCTT CGACGAAGCC GGTCCGGACG CAGCGTTCGA GCAGGGACTC GCGGTGATTG TCGATGGATT GGCGAAAAGG AGGCTCGTTG TCAGGAACGT TGAAGGACCG AGAAAGGGTG ACGATTGA
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Protein sequence | MFISDKVSSM TKLQPNTVIR AALDLLNEVG VDGLTTRKLA ERLGVQQPAL YWHFRNKRAL LDALAEAMLA ENHTHSVPRA DDDWRSFLIG NARSFRQALL AYRDGARIHA GTRPGAPQME TADAQLRFLC EAGFSAGDAV NALMTISYFT VGAVLEEQAG DSDAGERGGT VEQAPLSPLL RAAIDAFDEA GPDAAFEQGL AVIVDGLAKR RLVVRNVEGP RKGDD
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