| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0099 |
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| Symbol | ompT |
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| ID | 6106504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 74276 |
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| End bp | 75229 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641614844 |
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| Product | outer membrane protease |
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| Protein accession | YP_001739985 |
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| Protein GI | 170650768 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4571] Outer membrane protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0161825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00000610402 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACTTAA AGATTCTTGC TACTGCACTC TCAGCTCCTG TAGCGTTTGC TGCACTGGCT
TCTGATACTG GGCTTTCTTT TACACCGGAG AAAATCAGTA CGGAGATTGA TTTTGGCACT
TTAAGTGGCA AGGCCAAAGA ACGGGTTTAT CTGCCTGAAG AAAAAGGGCG CAAAGCCAGC
CAGCTGGACT GGAAATACAG TAATGCGCCA ATTGTCAAGG GGGCATTTAA CTGGGATCTG
TTACCCAGAG TATCTGTCGG TGCCTCAGGG TGGACAACAT TAGCTGGTCG TGGAGGCAAT
ATGGTGGACA GGGACTGGCT GGATACGAGC AATCCCGGAA CCTGGACTGA TGAGAGTAAA
CATCCGAATA CCCGTCTAAA TTTTGCTAAT GAATTCGACC TGAATATTAA GGGATGGCTC
CTGAATCAAC CAGACTATCA GTTAGGTCTT ATGGCTGGTT ACCAGGAAAA TCGTTATAGC
TTTACAGCAA AAGGAGGCTC TTATATCTAT AGTAGTGAGG GAGGCTTCCG GGATGAAACG
GGATCATTTC CAGATGGTGA AAGAGCTATA GGCTACAAAC AACACTTTAA AATGCCCTAT
ATAGGGTTAA CCGGTAATTA TCGGTATGAT AGCTTTGAGT TCGGGGGGAG TTTCAAATAT
AGCGGATGGG TGAAGGCATC GGATAATGAT GAGCATTACA ACCCTGAGAA AAGGATCACC
TATCGTAGCG ATGTAAATAA TCAGAACTAT TACTCTGTCT CACTACATGC TGGTTATTAT
ATTACACCTG CAGCTAAAGT TTATGTCGAA GGAACATGGA ACCGTATTAC TAATAAGAAA
GGTGATACTT CTCTGTACTC CAGAAATTTG AATATATCTG ATCACACCAA AAATGGTGCA
GGCATTGAAA GCTATAACTT TATGACCACA GCTGGTCTGA AGTATTATTT TTAA
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| Protein sequence | MYLKILATAL SAPVAFAALA SDTGLSFTPE KISTEIDFGT LSGKAKERVY LPEEKGRKAS
QLDWKYSNAP IVKGAFNWDL LPRVSVGASG WTTLAGRGGN MVDRDWLDTS NPGTWTDESK
HPNTRLNFAN EFDLNIKGWL LNQPDYQLGL MAGYQENRYS FTAKGGSYIY SSEGGFRDET
GSFPDGERAI GYKQHFKMPY IGLTGNYRYD SFEFGGSFKY SGWVKASDND EHYNPEKRIT
YRSDVNNQNY YSVSLHAGYY ITPAAKVYVE GTWNRITNKK GDTSLYSRNL NISDHTKNGA
GIESYNFMTT AGLKYYF
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