| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0038 |
|---|
| Symbol | traL |
|---|
| ID | 6106631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010488 |
|---|
| Strand | - |
|---|
| Start bp | 34581 |
|---|
| End bp | 34892 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641614785 |
|---|
| Product | conjugal transfer pilus assembly protein TraL |
|---|
| Protein accession | YP_001739926 |
|---|
| Protein GI | 170650856 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02762] type IV conjugative transfer system protein TraL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.889559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGAG ACGAGAATAA ACTTAAGAAA TATCGTTTCC CGGAAACACT GACCAACCAG
AGCCGCTGGT TTGGCCTGCC ACTGGATGAA CTGATCCCCG CAGCAATCTG TATTGGCTGG
GGTATCACAA CATCGAAATA TCTGTTCGGT ATTGGTGCAG CGGTTCTGGT TTATTTCGGG
ATTAAAAAAC TGAAAAAAGG GCGGGGCAGT TCCTGGTTAC GTGACCTGAT TTACTGGTAT
ATGCCAACAG CCCTGCTGCG CGGTATTTTT CATAATGTTC CCGATTCGTG TTTCCGGCAG
TGGATTAAAT AG
|
|---|
| Protein sequence | MSGDENKLKK YRFPETLTNQ SRWFGLPLDE LIPAAICIGW GITTSKYLFG IGAAVLVYFG
IKKLKKGRGS SWLRDLIYWY MPTALLRGIF HNVPDSCFRQ WIK
|
|---|
| |