| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0017 |
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| Symbol | trbB |
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| ID | 6106508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 19313 |
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| End bp | 19858 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641614764 |
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| Product | conjugal transfer protein TrbB |
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| Protein accession | YP_001739905 |
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| Protein GI | 170650781 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02738] type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.412477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCTCA TTAAATCACT GTTGTTCACC CTGTTGCTGG CAGCCGCTGC CGTGCAGGCC
TCCACCCGGG ATGAAATTGA ACGACTCTGG AATCCGCAGG GCATGGCCGC GCAGCCTGCA
CAACCGGCAG CAGGCACGTC AGCCAGGACA GAAAAGCCAG CCCCCCGCTG GTTCCGCCTC
AGCAACGGCA GGCAGGTTAA CCTGGCCGAC TGGAAGGTGG TGCTGTTTAT GCAGGGGCAT
TGCCCTTACT GTCACCAGTT TGACCCGGTA CTGAAACAGC TGGCACAGCA GTACGGCTTT
TCCGTTTTTC CCTACACCCT GGATGGTCAG GGGGATACCG CCTTTCCGGA GGCATTGCCG
GTGCCACCGG ACGTGATGCA GACCTTCTTC CCTAATATCC CGGTGGCCAC ACCGACCACC
TTCCTGGTCA ACGTCAACAC GCTTGAGGCA TTACCGCTTT TACAGGGGGC AACGGATGCT
GCCGGTTTTA TGGCGCGGAT GGATACCGTT CTGCAGATGT ACGGAGGGAA AAAAGGTGCG
AAATAA
|
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| Protein sequence | MSLIKSLLFT LLLAAAAVQA STRDEIERLW NPQGMAAQPA QPAAGTSART EKPAPRWFRL
SNGRQVNLAD WKVVLFMQGH CPYCHQFDPV LKQLAQQYGF SVFPYTLDGQ GDTAFPEALP
VPPDVMQTFF PNIPVATPTT FLVNVNTLEA LPLLQGATDA AGFMARMDTV LQMYGGKKGA
K
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