Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1805 |
Symbol | |
ID | 6093256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1823126 |
End bp | 1826167 |
Gene Length | 3042 bp |
Protein Length | 1013 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642489002 |
Product | helicase domain-containing protein |
Protein accession | YP_001739819 |
Protein GI | 170289581 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAGGT TACCTGAGGT CATACTCAGA AAAGTTACAC TGAGCAATCC CGCTCTCTTT TATTCCTCGC TGACTTCTCC CTCGAACAGA AGGAGAATAG AAGCTTTCAA GCATCAGTTT CAGACGCTCT GTCATGCCAT GCTTTCAAGG CCTGTGAGAA TTCTAATAGC CGATGAGATA GGCCTCGGAA AAACCATCCA GGCTCTTGCA ATAGCGAGAT ATTTAGAGCT TCAAGGTGAA GCAAAAAAGA TTCTGATCCT CGTTCCCAAG ATCCTCAGAG AGCAGTGGAA ACAGGAGATA AGAAGATTGG GAGGAAAACC GGTTGTCATA ACGAATGGAA GCGAAGTGGA AAGAAAACTT CTCAGAAAGG CTACTTTTAA TAATGCTGCC GAGTATTTTG TGGTGTCAAT CGATCTGGCA AAGAGTCAAA ACCATTCAGA AAAGTTCTCG GCGATAGATT GGGATCTTCT AATCGTTGAC GAGGTTCATA ATGTAACTTA CAACACACAG AGATACAACT TTTTGAAGAG TCTGATCGAA AAATCAAAAG AGGACCTCAA CATCGTATTT CTCTCCGCAA CACCGCACAG AGGTAATCCG AAAGACTATA TAGAAAGGCT CAGACTCCTT GATCCAACAC TGACAGCCGA TTGGAACGCT CTGGACAGCG AGAAGTTCTA CAGAAGAACT CACGGGGTTC TGGTTTTTCG TCGAACAAAA AAGGTTGTCA ACGATCTGGA GAAGAGAGAG ATCTTCAAAA AGTGCGATTT CAACGCTGTG ATAGTTGATA TTACCGAAGA AGAAAAACGT TTCTTTGAGG AACTGGATGA AGTGCTCTTT GAAATGGTCA AGGATGTTCA TATGAACTCT CCTGTTGCTC TTCTTGCTGT ACTTTTGAGA AAAAGAGCGG CTTCGAGTTA CGAATCCGCT TTGAAAACTA TAAACAACAT CATCAAAAAT CAGTATTCCG GGGCTTCAGG TGAAGACGTG CTGGAAGATC AGATCAAGCA GATATTCGGC CTCGGGTACG ATGAGATGGA ACTGGAAGAA AATTCAGAAA TAGACGATCT GATCAGTAGC ATAATAAACA GCGTGGCCAA AAGATACCCT CTTGATAAAG GACAGATTAA CGCGTTAGAA AAGATCCTGA AGATTGGAAA GGCCATCGGA AAAAACGACA GCAAGTTGAA AACTCTTGCC GAAGTTCTCG CATATCACCT GAAGAAAAAC GAAAAGGTGA TCGTATTTAC AGAATTCAAG GACACACTGG AATACCTTAG GAACAATCTT CCAACACTCC TCGAACAAGA AGGTATTCAC CTTTCTGAGG AAAAGGATAT ATCTGTACTT CATGGCGGAA TGAAAAGCGA AGAAATAGAA AAACAGGTGG AGAAATTTGC AAACGATGGA AAACTACTGA TCTCAACCGA TGTGGCATCC GAGGGATTGA ACCTGCAGGT GGCAAACATC CTGATCAATT ACGAAATCCC TTGGAGTCCG ATAAAGCTCG AACAGAGGGT GGGAAGAATC TGGAGACTGA ATCAGACAAA AGAAACGATC GCTTACACCC TTCTTCTCAA CCACGAGGCA GATCTTCAGA TACTGGAAAG CCTTTATCAG AAGATCCTGA ACATAACTGA TGCTGTTGGA ACTGGGCCGA ACGTTGGTAA GCCAGTTTTT GGAACGAGAA CGCTCAGTGG AAATTTCGAG TATCGGCTGG AGAACGTTCA GGACGAGGAA ACTTCGGATT CTCCTGTGTC CGAGTTCGAA CTGATGCTCT CTGCCATCAA AAGGAGGAAT TTAGATGAAC AGACAAAACG TATAATCAGC ACTTTGAAAT CTCTCAGAAC GAAGATCGAA GAAGTCGTTC CTTTGAACAC CTGTAATGAA ATTCAAGAAG AACTGAACAG TGTTCTTTTA CCTGACGATA TGGAATCGGA GATCGTTTTC GAGAAACTTA AAAAGTACAT ATCAGTTTTT GAAAATAGTT TTATCAATAG TATAGGTTCA TACCTTTTTA AAATTCTGAC AGATAGAATA CATGAACCAC TTCTGAACGA GAAGTGTTTA AAAATAGCCG TTAAAAATGA GTCAAAAGAA TACAGACTTT TCCAGGTGGA AGTCATCGAT CGAGGAAGAA AGATATACGA GTATCCTGTA CTAATTGAAA TCGGTGGAAA CGTTTCACCT CAGCTCTACC GTGGTACTTC TCTTTTGGAA AAGCTGGCAG ATGTGTTTTC AAAAGAATGG TTCGTTATTG AATGGGCAAA TCCAAAAGAG AAGATGGATA TTCAAACCGC GAAATTGATA GATCGGAGTG CCAAAGATTT ACAAAGCATC ATGAATAAAC ACACAGATTA TGACACTGAA CTGAATGAAT CTTTTATGAA AACAGGCTCA CTGTTCATAA ATCTGGACAC GAAGTCATCT GAGATTTTGA GAGTTGAGGG TGTATCCGAC AGGGAATTTT CCATTTTTAA ACTATTTCAT CCTTCCATTC TTGAAATCCT CGGCCTTCCT CCAGACAGCT TTGATCTTCC ATCGAACGAC TATGAAAGAT GGATGGAAAG AGGTTTCGTT CCACTCGAAG ATATTCTTGA AAGTGAAAGA AAAGCCATGG AAATTGTTAT GAACATAGAA AAGAAGCGTC TAATTGAAAA GTATGGGGAA AGCTCTGACT GGAAGGTAGA GGATGTTTCT TTGAAGGAAC ACTACGATAT AAAAGTCTCT GAACCAGAAG GTGAGAAGTA CATAGAAGTC AAGGGACACA AACCCTTGTG GCTGTCCGCT GAGTTGACCG CGGCTGAGCA CAGATTCGCA AATGACAATC GGGATAGATA CTGGATCTAC ATAGTTTCCA ACCTTGGAGG TAAAAAGCCC GTAATTTTAA AGATCTTCAG CCCGTTCGAT GATGAAAAAA GAAGAATATA CCTGGTTCAC GAGAATAAAG ACATTGATAT CACCGAAATA TTTGGATCGA CAATAAAAAC AAAACAACGA TACGTCATTT CACTCGGACA GAAAATATAC CGCAGGAGGT GA
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Protein sequence | MERLPEVILR KVTLSNPALF YSSLTSPSNR RRIEAFKHQF QTLCHAMLSR PVRILIADEI GLGKTIQALA IARYLELQGE AKKILILVPK ILREQWKQEI RRLGGKPVVI TNGSEVERKL LRKATFNNAA EYFVVSIDLA KSQNHSEKFS AIDWDLLIVD EVHNVTYNTQ RYNFLKSLIE KSKEDLNIVF LSATPHRGNP KDYIERLRLL DPTLTADWNA LDSEKFYRRT HGVLVFRRTK KVVNDLEKRE IFKKCDFNAV IVDITEEEKR FFEELDEVLF EMVKDVHMNS PVALLAVLLR KRAASSYESA LKTINNIIKN QYSGASGEDV LEDQIKQIFG LGYDEMELEE NSEIDDLISS IINSVAKRYP LDKGQINALE KILKIGKAIG KNDSKLKTLA EVLAYHLKKN EKVIVFTEFK DTLEYLRNNL PTLLEQEGIH LSEEKDISVL HGGMKSEEIE KQVEKFANDG KLLISTDVAS EGLNLQVANI LINYEIPWSP IKLEQRVGRI WRLNQTKETI AYTLLLNHEA DLQILESLYQ KILNITDAVG TGPNVGKPVF GTRTLSGNFE YRLENVQDEE TSDSPVSEFE LMLSAIKRRN LDEQTKRIIS TLKSLRTKIE EVVPLNTCNE IQEELNSVLL PDDMESEIVF EKLKKYISVF ENSFINSIGS YLFKILTDRI HEPLLNEKCL KIAVKNESKE YRLFQVEVID RGRKIYEYPV LIEIGGNVSP QLYRGTSLLE KLADVFSKEW FVIEWANPKE KMDIQTAKLI DRSAKDLQSI MNKHTDYDTE LNESFMKTGS LFINLDTKSS EILRVEGVSD REFSIFKLFH PSILEILGLP PDSFDLPSND YERWMERGFV PLEDILESER KAMEIVMNIE KKRLIEKYGE SSDWKVEDVS LKEHYDIKVS EPEGEKYIEV KGHKPLWLSA ELTAAEHRFA NDNRDRYWIY IVSNLGGKKP VILKIFSPFD DEKRRIYLVH ENKDIDITEI FGSTIKTKQR YVISLGQKIY RRR
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