| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1711 |
|---|
| Symbol | |
|---|
| ID | 6093162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1729612 |
|---|
| End bp | 1730970 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642488911 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit D |
|---|
| Protein accession | YP_001739728 |
|---|
| Protein GI | 170289490 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCTTTC TTGTTTATAA TTTCCTCATT ATATCGCTCG GGATTGTCTT TCTTTTCTTA
AAGAGGAAAG CTCCCTGGTG GACAGCACTG GTGAATCTTG TTTTCACAGT CACGATGGTG
CTTTCTGGAT ATCGTTTCGA TCTTGTTTTG ACAGGAAACT TCGGTGTCCA CCTTCTGTTA
GATCAGACAT CATATTTCTT TCTCATCCTC ACGGCCGTGG TTCTTCTCGC TGTCTTCACG
AAAGACTTGA ACGTCAGTCT TTCGAACCTT CTTCTGATAC TCCTTGGAGC GCTGAACCTT
GCGTTCGTGA GCTACGATCT CTTCAACATA TACGTCACGG TTGAGGTGGT ATCCCTCATC
ACTTTCCTTC TCGTCGTAGA GGGAAGAAAG AAGATTCAGT ACTGGTCCGC TTTCAAGTAT
CTGATCCTGG GTACTGTGGG CATGAATCTG TACCTGATAG GAATCGGATT TCTATACGCG
GAAAACGGCA CACTCTCGAT CTCTGACATC TCGAAGGTTG ATTCATTCGC CTCCGCTCTC
GTCGCGGTTG GACTTCTTTT AAGAGCCGGT GTGTTCCTCT TCAGTATGTG GCTTCCACAG
GTTCATTCGG AGGCAGAAAC ACCCGTTTCA GCAATTCTAT CCGGTGTCGT TGTGAAGAGT
GCTGTGTACG CACTCGTTCG GCTGGAACAC GTGGTGAACT GGGATGTGGT GAAGATCTTT
GCCATCTTTT CGGCACTTTC AGGTGTTTTG TTTGCCTTTC TTTCGAAAGA TTACAAGAGG
ATACTTGCCT ACAGTACTCT TTCACAGATA GGGATCGTCC TTGCGTCACC GGTTACAGCT
CCAGTTTACG CCCTCGCACA CGGTGTTTTC AAATCCTGGC TCTTTCTTCT GAAAGATGAA
CTTCCGGAAA GGGACGTGAC GAAGTGGAAA AGGCTTGATT TCTGGACGTG GCTTTCTCTT
TCGCTGGCAA GTCTTTCTAT CATGGGACTT CCCGGCCTTG CGGGTTTTTC GAAGAATCTG
GTTCTCGAAC AGCTTCACGG ATGGGAGAAG ATCTTCATGG AAGTTGTTTT CGTTGGCACC
GCGGCTTCCT TCTGGAAATT TCTTCTGAAA CCTTTTGAAT TCAAAAAGAA GCTACCAGGG
ATGTACAATC CCGTTCTGCT CATTGCTTCC CTGACGATAG GACTCTACTT TGCCAGCTGG
GAAAGAGTTC TTGAAAGCTT TCTCTTAATG GGTGCAGGAC TTTTGGTTCA TTTCCTCTTC
AAGAACTTGA AGATAGAAAA ATATCCGCTT GAAGACTTCG AGTCCATGCT CGGGGTCTAT
CTTTTGGGGG TGGTGGCTTG TCTTTTCTTG TCGCTGTGA
|
|---|
| Protein sequence | MIFLVYNFLI ISLGIVFLFL KRKAPWWTAL VNLVFTVTMV LSGYRFDLVL TGNFGVHLLL
DQTSYFFLIL TAVVLLAVFT KDLNVSLSNL LLILLGALNL AFVSYDLFNI YVTVEVVSLI
TFLLVVEGRK KIQYWSAFKY LILGTVGMNL YLIGIGFLYA ENGTLSISDI SKVDSFASAL
VAVGLLLRAG VFLFSMWLPQ VHSEAETPVS AILSGVVVKS AVYALVRLEH VVNWDVVKIF
AIFSALSGVL FAFLSKDYKR ILAYSTLSQI GIVLASPVTA PVYALAHGVF KSWLFLLKDE
LPERDVTKWK RLDFWTWLSL SLASLSIMGL PGLAGFSKNL VLEQLHGWEK IFMEVVFVGT
AASFWKFLLK PFEFKKKLPG MYNPVLLIAS LTIGLYFASW ERVLESFLLM GAGLLVHFLF
KNLKIEKYPL EDFESMLGVY LLGVVACLFL SL
|
|---|
| |