| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1549 |
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| Symbol | |
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| ID | 6092997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 1557661 |
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| End bp | 1560723 |
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| Gene Length | 3063 bp |
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| Protein Length | 1020 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642488749 |
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| Product | endo-1,4-beta-xylanase |
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| Protein accession | YP_001739568 |
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| Protein GI | 170289330 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0176143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTCTC TTCTGAGATT GTGTCTTTTC CTTGTTCTTG TGAGCGCTCT TGTCACTGGA
GGTGAAATCA TGAACTTTGA AAGGGAGGAA GAAGGGGTTT CACCCTTTGG AAGGGCAGTT
GTTACACTCT CACAGGACGT TTCCTTCAGA GGAGTTTACT CCCTGAAAGT GGATGGCAGA
ACTTCACTCT GGGATGGAGT GGAGTTTGAC CTCACTGGAA AGGTTTCACC GGGGAAAGAG
TACAGGGTTT TCTTTTATGT GTACCAGACG TCGAACACAC CTCAACTCTT CAGCGTTCTT
TCCAGAGTTG TGGATGAAAG TGGAGAAAGG TACGAGATAC TCCTCGATAA AGTCGTCACA
CCGGATGTCT GGAAGAAGAT GGAACTGATC TTCACGTCAC CTCAGAGAGC AGAAAAATTC
TCGTTGATCG TTGCCTCACC TGAAAAAACG AACTTTCCGT TCTACATCGA TGAACTTCAA
CTCTCCAGCC CGGATGAAGT TCAGGCACCT CCACCGGTTC TTCACTGCTC CTTCGAGAGT
GAAACAGCCG AAGGCTGGAT ACCACGAGGA AATGCAAAAC TTCAGGTCAC TTCCAGGGTT
TCTCACACCG GTAGAAACGC CCTTCTCATC TCTGAAAGGT CTGCCAGCTG GGAGGGAGCA
CAGTTCGATC TGAAAAGCAT CGTAAAACCA GGAAAGACCT ACACCTTCGA GATGTGGGTG
TATCAGGATT CTGGAAGCCC TGTCGGCATC CTCATGAGGA TGACACGAAA GTTCAAAGAC
GAAATCACAA CGAAGCACCC CATCTGGCTG TATGGAAGGA CGGTTCCGTC AGGAAAGTGG
GTGAGGCTGT TTGGTATCTT TGGACTCCCA GAAGGAGTGG ACGTGGATCA ACTTGTTCTT
TACGTCTACA CGGATGGCTC GAACACGGAC TTCTACATCG ACGATGTGAA GATCTACGAC
AGACCGCTTG TGTCGTTCGA AGAGGATGTA CCTTCCCTGA AAGAGGTCTT CAAGGATCAA
TTCAAAGTCG GTGCCGGGAT CTCCGAAAAA TCCATCCTCA CTCCCTTTGA CCTTGAGTTT
CTCAAAAAGC ACTTCAACAG TGTCACGGAG AGGAACAACA TGAAACCGGT GAATCTGTTC
GCCGGTGTTG AAAACGGCAA ACTGAAGTTT GACTTTTCAC TCGCTGATCT GTTCGTTGAC
ACAGCACTTA AGAACGGGAT CTCCGTGAGA GGTCACACAC TGGTATGGCA CAATCAGACG
CCCGAGTGGT TCTTCAAAGA CGAAAATGGA AACCTTCTGA GCAAAGAAGA GATGACAGAA
AGGATCAGAG AATACATACA CACCGTTGTT GGACACTTCA AGGGGAAGGT CTACGCATGG
GACGTTGTAA ACGAAGCGGT CGATCCAAAC CAGCCGGATG GACTGAGAAG ATCGACGTGG
TATCAGATCA TGGGGCCTGA CTACATAGAA CTTGCGTTCA GGTTTGCAAG GGAAGCAGAT
CCCGATGCGA AACTCTTCTA CAACGACTAC AACACCTTCG AACCCAAAAA GAGAGACATC
ATCTACAATC TTGTGAAGAG TTTCAAGGAG AAAGGTCTCA TCGATGGGAT AGGCATGCAG
TGTCACATCA GTCTTGCAAC GGACATCAGG CAGATCGAAG AGGCCATCAA AAAGTTCAGC
ACCATCCCCG GTATAGAAAT TCACATAACC GAACTGGACA TCAGTGTTTA CAAAAGCTCC
GGAGGTTACT ACGAGAGGCT TCCAAGAAAC GTGGAGGTGG AACTTGCACA CAAATATGCC
CAGCTGTTCA GCATCTTCAG AAAGTACAGC AACGTGATCA CCAGCGTGAC GATGTTCGGC
CTGAACGACG GAGACGCCTG GAGTAGAAGA AACAACTGGC CATTTTTGTT CGATGAGTAC
TACCAGACAA AACTTGCCTT CTGGGGAGTT GTGGATCCTG AACTTCTTCC GCCACTGCCA
AAGACCTCTA CCATCTCAGA GGGTGAGGCC GTGGTGGTTG GAAAGATGGA CGACTCCTAT
CTGATGTCGA AGCCGATAGA GATCTACGAT GAAGAAGGGA ACGTGAAGGC AACGATCAGA
GCGATATGGA AAGACAGCAC GATCTACGTG TACGGAGAGG TTCAGGATGC GACGAAGAAG
CCAGCAGAGG ATGGAGTAGC GATCTTCATC AACCCGAACA ACGAAAGGAC ACCATACCTG
CAGCCGGATG ACACCTACGT TGTGCTGTGG ACGAACTGGA AGAGTGAGGT CAACAGGGAA
GACGTAGAGG TGAAGAAATT CGTTGGGCCT GGATTCAGAA GGTACAGTTT TGAGATGTCG
ATCACGATAC CTGGTGTGGA GTACAGGAAA GACAGTTACA TAGGGTTCGA TGTAGCGGTG
ATAGACGACG GGAAATGGTA CAGCTGGAGC GACACGACGA ACAGCCAGAA GACGAACACG
ATGAACTACG GAACGCTGAA ACTTGAGGGA GTGATGGTGG CAACGGCGAA ATATGGAACA
CCAGTCATCG ATGGAGAGAT CGACGATATT TGGAACACGA CGGAGGAGAT AGAGACGAAA
TCGGTTGCGA TGGGATCACT GGAGAAGAAC GCAACGGCTA AGGTGAGGGT GCTGTGGGAC
GAGGAGAATC TGTACGTTCT TGCGATAGTG AAGGATCCGG TTTTGAACAA AGACAACAGC
AATCCGTGGG AGCAAGATTC GGTGGAGATC TTCATAGACG AGAACAACCA CAAGACAAGC
TACTACGAAG ACGATGATGC GCAGTTCAGG GTGAACTACA TGAACGAGCA GTCGTTTGGG
ACGGGAGCGA GTGCGGCGAG GTTCAAGACG GCGGTGAAGT TGATCGAGGG AGGCTACATA
GTAGAGGCGG CCATCAAGTG GAAGACGATC AAGCCGAGTC CGAACACGGT GATAGGTTTC
AACGTTCAGG TGAACGATGC GAACGAGAAG GGTCAGAGGG TTGGTATCAT CTCCTGGAGT
GATCCAACGA ACAACAGCTG GAGAGATCCT TCAAAGTTCG GAAACCTGAA ACTCCTGAAA
TGA
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| Protein sequence | MRSLLRLCLF LVLVSALVTG GEIMNFEREE EGVSPFGRAV VTLSQDVSFR GVYSLKVDGR
TSLWDGVEFD LTGKVSPGKE YRVFFYVYQT SNTPQLFSVL SRVVDESGER YEILLDKVVT
PDVWKKMELI FTSPQRAEKF SLIVASPEKT NFPFYIDELQ LSSPDEVQAP PPVLHCSFES
ETAEGWIPRG NAKLQVTSRV SHTGRNALLI SERSASWEGA QFDLKSIVKP GKTYTFEMWV
YQDSGSPVGI LMRMTRKFKD EITTKHPIWL YGRTVPSGKW VRLFGIFGLP EGVDVDQLVL
YVYTDGSNTD FYIDDVKIYD RPLVSFEEDV PSLKEVFKDQ FKVGAGISEK SILTPFDLEF
LKKHFNSVTE RNNMKPVNLF AGVENGKLKF DFSLADLFVD TALKNGISVR GHTLVWHNQT
PEWFFKDENG NLLSKEEMTE RIREYIHTVV GHFKGKVYAW DVVNEAVDPN QPDGLRRSTW
YQIMGPDYIE LAFRFAREAD PDAKLFYNDY NTFEPKKRDI IYNLVKSFKE KGLIDGIGMQ
CHISLATDIR QIEEAIKKFS TIPGIEIHIT ELDISVYKSS GGYYERLPRN VEVELAHKYA
QLFSIFRKYS NVITSVTMFG LNDGDAWSRR NNWPFLFDEY YQTKLAFWGV VDPELLPPLP
KTSTISEGEA VVVGKMDDSY LMSKPIEIYD EEGNVKATIR AIWKDSTIYV YGEVQDATKK
PAEDGVAIFI NPNNERTPYL QPDDTYVVLW TNWKSEVNRE DVEVKKFVGP GFRRYSFEMS
ITIPGVEYRK DSYIGFDVAV IDDGKWYSWS DTTNSQKTNT MNYGTLKLEG VMVATAKYGT
PVIDGEIDDI WNTTEEIETK SVAMGSLEKN ATAKVRVLWD EENLYVLAIV KDPVLNKDNS
NPWEQDSVEI FIDENNHKTS YYEDDDAQFR VNYMNEQSFG TGASAARFKT AVKLIEGGYI
VEAAIKWKTI KPSPNTVIGF NVQVNDANEK GQRVGIISWS DPTNNSWRDP SKFGNLKLLK
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