| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1519 |
|---|
| Symbol | |
|---|
| ID | 6092967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1527335 |
|---|
| End bp | 1528111 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642488722 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001739541 |
|---|
| Protein GI | 170289303 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAG TCGTAGAAGT GTCCGGTGTC AGGAAATCCT TCGGAGAACT TCGAGTTCTC
GATAAAGTTG ATTTTTACGC AGAAGAGGGA GACTTCAAGG TAATCGTCGG CGAGAACGGT
TCGGGAAAAA GCACACTGCT GAAAATCATG ATAGGTCTCT TGCTTCCTGA CGATGGGGAA
GTGAAGGTTC TCGGCGTTGA TGTGAAAAAG CACTGGAAGA AACTATCTGC GAGAATAGGG
GTGGTTCTTG CAAACGAGAG AAGTCTGTAC TGGAAACTCA CTGCCTGGGA AAACCTCGAT
ATCTTTGGGG GTGTATACGG CGTACCGAAA AAAGTCAGAA GAGAACGAAT GGAAGAGCTT
CTCAAAAGAT TCGGTCTGTT CGAATACAAA GACAAACCCG TCGAAGAGTT TTCAACGGGC
ATGAGGAAAA AGTTGATGAT TTGTAAAGCG CTAATTCACG ATCCAGAGGT ACTGTTCATC
GACGAGATAC TCAACGGTCT GGATCCACCG TCGGTGCGTG AAATGGTCGG TTTTTTGGAT
GAACGGAACA GGAGGGGATT GACTATCGTA ATGATAAGTC ATGTACTTCA CGTTCTTCCC
GAGAATGCCT GCGTTGTTCT TCTTAGAAAC GGTCGTGTAC AGATGGAAGT GAGATACAAG
GATATCCGCA GCGAAAGAAG CGAAGTATAT GAGGTGTTCG AAAACCTCAT CAGGGGGCGA
AATATGGATG AGGAAGATAC TCCATCTGGT TCTGAAGGAG ATGAAGATAA GGCTTAA
|
|---|
| Protein sequence | MRKVVEVSGV RKSFGELRVL DKVDFYAEEG DFKVIVGENG SGKSTLLKIM IGLLLPDDGE
VKVLGVDVKK HWKKLSARIG VVLANERSLY WKLTAWENLD IFGGVYGVPK KVRRERMEEL
LKRFGLFEYK DKPVEEFSTG MRKKLMICKA LIHDPEVLFI DEILNGLDPP SVREMVGFLD
ERNRRGLTIV MISHVLHVLP ENACVVLLRN GRVQMEVRYK DIRSERSEVY EVFENLIRGR
NMDEEDTPSG SEGDEDKA
|
|---|
| |