Gene TRQ2_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1279 
Symbol 
ID6092720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1307712 
End bp1308554 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content46% 
IMG OID642488480 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001739306 
Protein GI170289068 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0786025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGATCG CATTCTCAAA AAAAGAAAAA ATATTTCTCG CTGTCTTCAT TTCCCTCTAC 
GTTCTCGTTG CCATCTTGAG TATTCAGCAA CTGAAACGAA CACCCATGGA AGAGATCTTC
GGAGGTCTCG GTAAAAGGTG GATTGTGGAT GTAAACGGCT TCAGGATCAA TCCCATGACC
ATCATCGTTG GAACGGCTAT AGCGATCTTT CTAATAGTGC TCGCGTACAG ACTGAGAAAG
TTCGAAATGA TTCCAAACAG AAAGCAGGCT TTCATGGAGT CGATCCTCGA GATGTTTTAC
GAGATCGTTG ACGAATCGAT CCCAGATAAG CGATTCGTGA AACCCACTTT TGTAGTCGCA
ACCACACTTT TCCTCTTCAT CACCATCTCG AACATAATAG GTGGAGCGGT GCCGGGCGTG
AGTGTGGTCG CCGATGAAAC TGGAGCTGTT CAGAAAGTAG TACTCTTCAA CGACACCTGG
CCGGCACCAA CAGGAGACCT AAACACCAAT CTCACCTACG CCGTCATGGT CCTCATCATC
AGCCATGCTT TCGCCATAAA GTCCAAGGGA TTCAAAGAGT GGCTGAAGTC CTGGTTCTAT
CCAAATCCGG TTATGTTCCC TATAAACCTC ATCGGCGAAC TGGCAAAACC CATCTCCCAT
TCTCTGAGGT TGTTTGGTAA TATAGGAGGT GGAGCAATAC TCGTTTACAT CCTCTCTTAC
ATGACGAAGT ACTTCTTCGC TCCCATCATT TTCTGGGGAT TCTTCGGTAT CTTCGTTGGT
CTGGTACAGG CGTTCGTGTT CAGTATGCTC GCAGTTGCAT ACATCAGTTC ACAACTTTCG
TAA
 
Protein sequence
MKIAFSKKEK IFLAVFISLY VLVAILSIQQ LKRTPMEEIF GGLGKRWIVD VNGFRINPMT 
IIVGTAIAIF LIVLAYRLRK FEMIPNRKQA FMESILEMFY EIVDESIPDK RFVKPTFVVA
TTLFLFITIS NIIGGAVPGV SVVADETGAV QKVVLFNDTW PAPTGDLNTN LTYAVMVLII
SHAFAIKSKG FKEWLKSWFY PNPVMFPINL IGELAKPISH SLRLFGNIGG GAILVYILSY
MTKYFFAPII FWGFFGIFVG LVQAFVFSML AVAYISSQLS