| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1264 |
|---|
| Symbol | |
|---|
| ID | 6092705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1294662 |
|---|
| End bp | 1296317 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642488465 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001739291 |
|---|
| Protein GI | 170289053 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1031] Uncharacterized Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCGC TCATAGTGGA CGGTTACATA GACGAGCCCG CCGCCTTTGG TGTCCCACCT
TATGTGAGTC CGTACGTCAG GTACCTCGCA GGTGCACTTG TGGTTCATGA TGTAGAAGTC
GATTATGTCA CCATAGACAA AATGAGAAAG GAATCACTCT GGGAAATTGC GAACGAATAC
GACTTTCTTT TTGTTTTTGG TGGAATCACC GTGCCAGGTC GATACAAGGG CGGAACACCT
CTCACCCTTT CAGAGCTTCA GAGGATTCTC AGCATCGCAA GAAGGCCCAC CAAAATAGTG
GGAGGCCCAA TAGTTGGGGG ATATTCACTC AGAGGGGGAT CTGTGGCAAG ACGATTTGAC
ATACAGGCGG ATTATCTGGT GAGTGGAGAT ATGGAGGCTT TTGTAGTCTC CTATTTTCGA
GGTGTACCCG ATCCAGAGGC AAAAAGCGAT TATGAGCTGA TCGATGCGGT GGCACCTTAT
GGGGCCGTTG TCCTTGAGAA ACATCCGAAC TTTCCGCATG TCATATGCGA AATAGAAGTC
TCGAGAGGTT GTGAAAGAAG AACGTTCTGT TCTTTTTGTA CAGAGCCGCT TCTCCACGGA
AGGTTGAAAT CTCGAGATGT ACAGGCCATA CTGAAAGAGA TAGAGTCCCT CTACAGAGCT
GGATGCAGAG CATTTCGCTT CGGAAGGGCT GCAAATATCT TGGCGTTTGG ATCTGACAGA
AACGGAGGGA AGCCTTCCCC AGAGATCTTG GAAGAGCTGT ACTCGGGTAC CAGAGAAGTA
GCTCCTCATC TGGAAGTTCT CCACACGGAT AACGCCAACC CATCCTACCT TGTTACATAC
GAAAAGGAAT GTAGAAAGAT AGTTGAAACC ATTGTCAGAT ACAACACACC AGGTGATGTG
TTCTCCTTTG GAGTGGAGTC CTTCGACGAA AATGTTCTGA AGAAGAACAA CGTTCAGGGT
TCGCCGGAAG AGTTTTTGAA AGCCATCGCT GTTGTGAACG AGATAGGTGG AGTGCGGGTG
GATGGAATAC CAAAACTCCT TCCCGGTGTG AATCTGATCT TTGGTCTTCC GGGGGAAACG
GAAGAAACCC TCAAAAAGAA TTATTCATAT CTGAAGCGCA TTCTCGATGA AGGTTATCTT
CTGAGAAGGA TAAACATCAG AAAACTTCTC GCTTATCCGG GAACTCCGGT ATACGAGTAT
TTAAAGAATA AAAAGCACAG AATCAAAAGT TATCTTCATG ATCAGTGGAA AAGAAGGATA
AGGGAAGAGA TAGATCGTGA AATGCTGAAG AGAGTCTTCC CTGCCGGCAC TGTTCTAAAA
AAGGTGATAG TTGAGTACAG AGAAGGAAAA ATCTCTTTTG GAAGACAGCT AGGGAGTTAT
CCGATACTCG TCGGCATTCC AGGAAATCAC AGTGGTGTGC TGGACGTGGT TGTGGTTTCC
CACGGCGAAC GATCGGTGAC TGCCCTGCCT TACCCTTCCT TCATAAACTC CATGTCACTG
GAAGAACTCA CAGCGATACC CGGAATCGGA AACGCCCTCG CCAGAAAGAT CATTCTGAAT
CGTCCCTTCA GAAGCTGGGA AGATCTCAAG AAAGTAGTTC CCGCCGAGAC AGCGAACTTT
CTCAGAAATC TTGGCATTTC TTTACAGCAG GTGTAA
|
|---|
| Protein sequence | MRALIVDGYI DEPAAFGVPP YVSPYVRYLA GALVVHDVEV DYVTIDKMRK ESLWEIANEY
DFLFVFGGIT VPGRYKGGTP LTLSELQRIL SIARRPTKIV GGPIVGGYSL RGGSVARRFD
IQADYLVSGD MEAFVVSYFR GVPDPEAKSD YELIDAVAPY GAVVLEKHPN FPHVICEIEV
SRGCERRTFC SFCTEPLLHG RLKSRDVQAI LKEIESLYRA GCRAFRFGRA ANILAFGSDR
NGGKPSPEIL EELYSGTREV APHLEVLHTD NANPSYLVTY EKECRKIVET IVRYNTPGDV
FSFGVESFDE NVLKKNNVQG SPEEFLKAIA VVNEIGGVRV DGIPKLLPGV NLIFGLPGET
EETLKKNYSY LKRILDEGYL LRRINIRKLL AYPGTPVYEY LKNKKHRIKS YLHDQWKRRI
REEIDREMLK RVFPAGTVLK KVIVEYREGK ISFGRQLGSY PILVGIPGNH SGVLDVVVVS
HGERSVTALP YPSFINSMSL EELTAIPGIG NALARKIILN RPFRSWEDLK KVVPAETANF
LRNLGISLQQ V
|
|---|
| |