Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1020 |
Symbol | |
ID | 6092450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1066742 |
End bp | 1067404 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642488216 |
Product | CRISPR-associated Cas5 family Hmari subtype protein |
Protein accession | YP_001739053 |
Protein GI | 170288815 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1688] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR02592] CRISPR-associated protein Cas5, Hmari subtype [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTC TGGTTTTTGA TGTCTCCACT TCCTACGCTC TCTTTAGAAG GCCTTACACA ACGACATCGT CTTATACCCT TCCTTTTCCA CCAAGAACCG CTCTTTTAGG GCTTGTGGGG TGTGTTTTGG GATATTCCAC ACCTGAAAAA CTCGACAGTG CAAAAGTGGC GGTTCAGATA AAAAATCCTT TGAAGTTTCT GCGAACGGGA ACGAATTTTG TGGAAACAAA GAAAGACAAA AAAGCGTCGA AAAGAACAAG AATAAGTCTT CAACTTCTGA AGAATCCTGC TTACAGGGTG TTTTTCAGCT GGGAAGACAA AGATTTTGAG AGGTTGAAAA ATCTTCTCGA ACACAACGAA ACCATCTTCA CACCTTACCT TGGTGTGGCA AGCTTCATAG CTAAACTGGA TTACGTAGGA GAGTACGAAG CAACTCGCGT AGAAGATTTT CCCTGCGAGG TCCACACGGT TGTTCCGAAC ACCATAAAAA TCGTGCCAGA ACCTTCACAC TACCTCGTAT TCGAGAGGGT CACAAGAAGA ATGGATAAAG AAAGGAACTT GCTTGAATCT GCGGTTTACA TTTTTAAAAG AGACTTATCT CCTGTGAAGG TGGAAGGGGG AGAAGTGTGG AGAGTGGGAG ATCAGAACGT AGTGTGGATG TAG
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Protein sequence | MKVLVFDVST SYALFRRPYT TTSSYTLPFP PRTALLGLVG CVLGYSTPEK LDSAKVAVQI KNPLKFLRTG TNFVETKKDK KASKRTRISL QLLKNPAYRV FFSWEDKDFE RLKNLLEHNE TIFTPYLGVA SFIAKLDYVG EYEATRVEDF PCEVHTVVPN TIKIVPEPSH YLVFERVTRR MDKERNLLES AVYIFKRDLS PVKVEGGEVW RVGDQNVVWM
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