Gene TRQ2_0921 details

Gene Information

• Locus tag: TRQ2_0921
• ID: 6092351
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 954196
• End bp: 956124
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642488118
• Product: glycoside hydrolase family protein
• Protein accession: YP_001738955
• Protein GI: 170288717
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2273] Beta-glucanase/Beta-glucan synthetase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAGCA GGCTGGTTTT CGCTCTGCTT CTCTTTCCTG TTTTCATTCT GGCTCAAAAC 
ATCCTTGGCA ACGCTTCTTT CGATGAACCA ATCCTCATCG CAGGTATGGA TATAGACCCA 
CCCGCAGAGG ATGGTTCCAT AAACACAGAA GGAAACTGGG TATTCTTCAC CAATTCAAAC 
GGTGAGGGAA CGGCTCGAGT TGAAAACGGC GTTCTCGTGG TTGAGATAAC AAACGGAGGA 
GATCACACCT GGTCGGTTCA GATCATACAG GCTCCCATAC GTGTTGAGAA ACTCCACAAG 
TACAGAGTTT CTTTCCGAGC CAAGGCTTCC TCTCAAAAGA ACATCGGGGT GAAGATAGGA 
GGAACGGCCG GAAGAGGATG GACCGCGTAC AACCCCGGTA CCGACGAATC CGGCGGCATG 
GTCTTCGAGC TCGGAACAGA TTGGCAGAAG TACGAGTTCG AATTCGTCAT GAGACAGGAG 
ACCGATGAAA ATGCTCGTTT CGAGTTTCAG CTTGGAAGGT ATACCGGCAC GGTCTGGATA 
GACGACGTAG TGATGGAGGA CATCGGTGTT CTCGAGGTAA GCGGTGAGGA AAACGAAATC 
TACACCGAGG AGGATGAAGA CAAAGTGGAA GACTGGCAGC TCGTTTGGAG TCAGGAGTTC 
GATGACGGTG TTATCGATCC GAACATCTGG AACTTCGAGA TAGGAAACGG TCATGCAAAA 
GGTATTCCAG GCTGGGGTAA CGGGGAACTC GAGTACTATA CAGACGAAAA CGCGTTCGTT 
GAGAACGGCT GTCTTGTGAT TGAGGCGAGA AAAGAACAGG TTTCCGATGA GTACGGAACC 
TACGACTACA CCTCAGCCAG GATGACCACA GAAGGAAAAT TCGAAATAAA GTACGGAAAA 
ATCGAAATAA GGGCAAAACT TCCAAAAGGA AAAGGTATCT GGCCCGCTCT CTGGATGCTC 
GGAAACAACA TAGGAGAGGT CGGATGGCCC ACCTGTGGTG AGATAGACAT CATGGAAATG 
CTTGGCCACG ACACCAGAAC CGTTTATGGA ACAGCACACG GTCCGGGATA TTCCGGTGGT 
GCGAGTATAG GTGTTGCCTA TCATCTTCCA GAAGGAGTTC CTGATTTCTC CGAAGACTTC 
CACATTTTCT CCATCGAGTG GGACGAAGAC GAAGTGGAGT GGTACGTGGA CGGACAGCTC 
TACCACGTCC TCAGCAAGGA TGAACTGGCC GAACTCGGTC TTGAGTGGGT TTTCGACCAT 
CCGTTCTTCC TCATTCTGAA CGTTGCCGTG GGAGGCTACT GGCCAGGTTA TCCCGACGAA 
ACCACCCAAT TCCCGCAGAG AATGTACATC GACTACATCA GAGTCTACGA AGATAAGAAT 
CCTGAAACAA TCACCGGGGA AGTGGATGAC TGCGAATATG AACAAGCACA GCAGCAGGCA 
GGTCCCGAGG TGACCTATGA ACAGATAAAT AACGGCACTT TCGACGAACC TATTGTGAAC 
GATCAGGCCA ACAACCCGGA CGAATGGTTC ATTTGGCAGG CGGGAGACTA CGGAATCAGT 
GGTGCCAGGG TCTCCGATTA CGGTGTCAGG GATGGCTACG CTTATATCAC GATAGCCGAT 
CCTGGAACTG ACACGTGGCA TATTCAGTTC AACCAGTGGA TAGGTCTTTA CAGAGGAAAA 
ACCTACACCA TTTCTTTCAA AGCAAAAGCG GATACACCAA GACCTATAAA TGTGAAAATT 
CTGCAGAATC ACGATCCCTG GACCAACTAC TTCGCTCAAA CGGTGAATCT CACAGCGGAC 
TGTCAGACGT TCACGTTCAC CTACACGCAT CCAGACGATG CGGATGAGGT CGTTCAGATC 
AGTTTCGAAC TCGGAGAAGG AACGGCAACT ACGATTTATT TCGATGATGT CACGGTGAGC 
CCTCAATGA 

 

Protein sequence

MMSRLVFALL LFPVFILAQN ILGNASFDEP ILIAGMDIDP PAEDGSINTE GNWVFFTNSN 
GEGTARVENG VLVVEITNGG DHTWSVQIIQ APIRVEKLHK YRVSFRAKAS SQKNIGVKIG 
GTAGRGWTAY NPGTDESGGM VFELGTDWQK YEFEFVMRQE TDENARFEFQ LGRYTGTVWI 
DDVVMEDIGV LEVSGEENEI YTEEDEDKVE DWQLVWSQEF DDGVIDPNIW NFEIGNGHAK 
GIPGWGNGEL EYYTDENAFV ENGCLVIEAR KEQVSDEYGT YDYTSARMTT EGKFEIKYGK 
IEIRAKLPKG KGIWPALWML GNNIGEVGWP TCGEIDIMEM LGHDTRTVYG TAHGPGYSGG 
ASIGVAYHLP EGVPDFSEDF HIFSIEWDED EVEWYVDGQL YHVLSKDELA ELGLEWVFDH 
PFFLILNVAV GGYWPGYPDE TTQFPQRMYI DYIRVYEDKN PETITGEVDD CEYEQAQQQA 
GPEVTYEQIN NGTFDEPIVN DQANNPDEWF IWQAGDYGIS GARVSDYGVR DGYAYITIAD 
PGTDTWHIQF NQWIGLYRGK TYTISFKAKA DTPRPINVKI LQNHDPWTNY FAQTVNLTAD 
CQTFTFTYTH PDDADEVVQI SFELGEGTAT TIYFDDVTVS PQ