Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0787 |
Symbol | |
ID | 6092216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 812257 |
End bp | 813075 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642487984 |
Product | polyprenyl synthetase |
Protein accession | YP_001738822 |
Protein GI | 170288584 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.491944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGG AGAAAGTTGA AGAAAGAATA CGCGAGATTT TGAGGCCTGG ATGGGATCTT CTCACAGAAG AAGCCATGCT GTACTCCGCG ACGGTTGGAG GAAAGAGGAT CCGTCCTCTC CTCGTCTTGA CACTGGGTGA GGATTTGGGA GTGGAAGAGG AAAAGCTTCT CGATGTGGCG GTGGCCGTTG AACTCTTTCA CACGGCTTCT CTGATACACG ATGATCTTCC CCCAATAGAT AACGCGGATT TTCGAAGAGG GAAGCCTTCT TGTCATAGGA CCTATGGTGA AGATATCGCC CTTCTTGCGG GAGATGGTCT GTTCTTCCTC GCTTTTTCTC AGATATCTAA AATCGGAAAT TCAAAGATTT TTGAAGAGTT TTCGGAAACG GCCTACAAAC TTCTTTTGGG GGAAGCGATG GATGTGGAAT TCGAAAGAAG AAAGATGGAA ATCTCGCAGG AGATGGTGGA GAGAATGTAC GCTTTCAAAA CGGGAGCGCT ATTTGCTTTC TGTTTCTCAG CTCCATTTAT CCTGAAAGGA AAGGATCACA CCAAGATGAA ACTCCTCGGA GAGAAGTTCG GGGTGGCTTT CCAGATATAC GACGATCTGA AAGACATTCT TGGGTCTTTC GAAAAGGTGG GAAAGGACCT CGGAAAAGAC ACAGAAAAAG TGACGCTTGT GAAAAAGGTG GGGATTCAGA AAGCTCGTGA GATGGCCGAT AAGTATTATG AAGAAGTTTT GAAAGGTATC GAATCAGAAG GTCTCTTTCG CACGCTGTTT CTTCTGAAAG AACTCAAACA GATGGTGGAG GAGAGATGA
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Protein sequence | MKKEKVEERI REILRPGWDL LTEEAMLYSA TVGGKRIRPL LVLTLGEDLG VEEEKLLDVA VAVELFHTAS LIHDDLPPID NADFRRGKPS CHRTYGEDIA LLAGDGLFFL AFSQISKIGN SKIFEEFSET AYKLLLGEAM DVEFERRKME ISQEMVERMY AFKTGALFAF CFSAPFILKG KDHTKMKLLG EKFGVAFQIY DDLKDILGSF EKVGKDLGKD TEKVTLVKKV GIQKAREMAD KYYEEVLKGI ESEGLFRTLF LLKELKQMVE ER
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