Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0727 |
Symbol | |
ID | 6092144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 741195 |
End bp | 742793 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642487913 |
Product | flagellar M-ring protein FliF |
Protein accession | YP_001738763 |
Protein GI | 170288525 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.425125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATTG TTGAACGATT GAGAGACCTG TGGAAAAAGA TAGTAGACAT GTGGAGCTCC ATGCCTCGGG AAAGGAAATT CCTCGTGGGA GGAATAGGGA TTGCCCTTGT AATAACGATC GTTCTGTTCG CCGTTGTAAC GTCCGTTCCT CACTACAGAC TCCTTGTGGC TGGCCTCAAC GAAGACGAGG CAGGTGTGAT CATCCAGAAG CTCGAGGAGA TGAACATTCC TTACAAAGTA TCCCCTGGGG GAGATATATA CGTTCCTGAC AGTTACAACG TCTATGAACT CAGAATGAAA CTGGCGTCTG AAGGGGTTCT TGGAAGTTCA AGGAAAGGTT TTTCGATACT CAGTGAAAAC TCTTTCGGAG CCACGAGCTT CGACAAGCAG GTCAAATATC AGATCGCTTT ACAGGAGGAA CTCGAAAGAA GCATCATGAC GATAAAAGGT GTGAAAGATG CAAGAGTTCA CCTGGTCCTT CCGAAGTACA CCTATTACGT TCGTGGTGAG ATGGCAGAAC CCCGAGCATC AGTTCTCGTG GTCTTGGAGC CCGGTGCAGA ACTCACCCGC GAACAGGTGA GAGGAATCGT TGAGCTCGTC TCAGGAGCCG TTGAAGGGTT GAAACCGGAG AACGTGAGGG TAGTGGATAA CTACTCCAGA TCGCTGAGCG ACATGTTGGA AACAGACGAA GGAACTTTCC TTGCCTCCAG CAAACTGGAA TTGAAGCAAC AGCTTGAAAA ATACTACGAA AGCAAAATAA AGAAAGCACT GGAAAGTGTC TTCGGTCCTG GAAGGGTGGA GGTAATACCC GACATATCGA TCAATTGGTC CAAGATAGAA ACGGAGATGA AAAAGTACGA AGCACCTGCC AGAAGAGAAG GTCTGGTGAG GAGTCAGGAG ACGCAGGTGG AGAAGAGCCA AAACCTTTCT CCAACCGGAG GACCAGCGGG AACGGATTCG AACATACCGC CTTTCACCTA TCCATCAGCC ACATCCGAAG GAACGAGTAC CTACGAACGA ACCCATACCA TCACCAACTA CGAATTGAAC GAAGTGTATC AGAAGATAAT ACAGAACCGC GAAGGGGAGA TCTCCTCGCT TTCCGTCGCC GTCATAATCG ATGCCTCTTC TTCTGTTCTT CAAAACAACA GTGACTGGAG CAGTGTAATA AACGATCTCG TGGAAAAAGG GGTGGGCTCC ATAACGTCTT CCGCCTCTCT CAGCGTCGCG GTTGCCTTTT TGCCATTCGA TCGCTCCATC GAAAGAGCTC TTCAGGAAGA GTTGAAACAG ATTGAAACGA GAAGAAGGTT CATCCTGTAC TCGGTGGGAA TAGCCCTGCT TGGATTTCTC ACGTTCATAC TCATCTATCT TGTGATCGTT CAAATAAGAA GAATAAGGGC AAGAAGACTC GCAGAAGAAC GGAGAAGAAA ACTGGAAGAA GAGGTGAAAG AAATCCTCCA GGAAGAATTG AAGGAGGAAG AGGTATCGCC AGAAGAAAAG GAACTGCTCG AACTTGTAGA AGAGCTGGAG AACATCTTTT CCCGTTCACC TTCCGACATT GCCGAGATAG TCCGACTGTG GTTCTTTGAA AGGGGATGA
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Protein sequence | MNIVERLRDL WKKIVDMWSS MPRERKFLVG GIGIALVITI VLFAVVTSVP HYRLLVAGLN EDEAGVIIQK LEEMNIPYKV SPGGDIYVPD SYNVYELRMK LASEGVLGSS RKGFSILSEN SFGATSFDKQ VKYQIALQEE LERSIMTIKG VKDARVHLVL PKYTYYVRGE MAEPRASVLV VLEPGAELTR EQVRGIVELV SGAVEGLKPE NVRVVDNYSR SLSDMLETDE GTFLASSKLE LKQQLEKYYE SKIKKALESV FGPGRVEVIP DISINWSKIE TEMKKYEAPA RREGLVRSQE TQVEKSQNLS PTGGPAGTDS NIPPFTYPSA TSEGTSTYER THTITNYELN EVYQKIIQNR EGEISSLSVA VIIDASSSVL QNNSDWSSVI NDLVEKGVGS ITSSASLSVA VAFLPFDRSI ERALQEELKQ IETRRRFILY SVGIALLGFL TFILIYLVIV QIRRIRARRL AEERRRKLEE EVKEILQEEL KEEEVSPEEK ELLELVEELE NIFSRSPSDI AEIVRLWFFE RG
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