Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0607 |
Symbol | |
ID | 6092024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 612945 |
End bp | 613787 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642487793 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_001738643 |
Protein GI | 170288405 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.173614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATGTTA TTCAGAGGAT CAAGGAAAAA TACGATGAGT TCACGAATGC AGAGAAAAAA ATAGCTGATA CCATCCTTTC TGATCCGAAG GGAATTATAG AGAGTTCCAT CAGCGATCTC AGCGAAAAAG CAGGTGTGAA GAGTGAAGCT TCCGTCGTGA AGTTTTACAA AAAACTGGGA TTGAACAGCT TTCAACAGTT CAAGGTGCTT TTGGCTCAGA GCATCTCCAG GGCACCGCTC GAGATCGTCT ACGAAGATGT CTCGAGTGAG GACGATACGA AAACCATCAC GGAGAAGATA TTCAAAGCAA CAGTGAGGGC CATCCTGGAT ACACTGAATT GGATGGATGT CGATTCCATC GAAAAGGCCG TCGATCTGTT TAAAAACGCT CAGAGGATCA TATTCATCGG TTTCGCGGCC TCGGCAGCTG TTGCGTTTGA TGCGTTTCAC AAATTCACAA GAATAGGAAA GAACTGTCTG TTTTCTAACG ATGAGCACAT CATAGCAACC ATTCTTGCTA CAGCTTCACC AAACGATCTG CTGGTTGCCA TTTCGCACAC CGGAGAAACG ATCTCTGTGG TGAACTTCGC TAAAAAAGCG AAAGAGATGA AAATGCCGGT TGTTGCTATC ACAGGGAATA GAAAATCCAC GCTTGCGAAG TACTCGAATG TTGTCCTTGC CACCAACACA AAAGAGACGA AAATAAGAAC CGATGCGATG ACTTCGAGAA TAGTCCAGCT TGTGATTCTC GATACGATAT ACACGCTTTT AGCAGCAAGA GATCCAAGGG CAATAGAAAT TCTCAACAGG AGTAGACTCG CGGTTTCAGA ATTGAAGTAC TGA
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Protein sequence | MDVIQRIKEK YDEFTNAEKK IADTILSDPK GIIESSISDL SEKAGVKSEA SVVKFYKKLG LNSFQQFKVL LAQSISRAPL EIVYEDVSSE DDTKTITEKI FKATVRAILD TLNWMDVDSI EKAVDLFKNA QRIIFIGFAA SAAVAFDAFH KFTRIGKNCL FSNDEHIIAT ILATASPNDL LVAISHTGET ISVVNFAKKA KEMKMPVVAI TGNRKSTLAK YSNVVLATNT KETKIRTDAM TSRIVQLVIL DTIYTLLAAR DPRAIEILNR SRLAVSELKY
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