Gene TRQ2_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0607 
Symbol 
ID6092024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp612945 
End bp613787 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content44% 
IMG OID642487793 
ProductRpiR family transcriptional regulator 
Protein accessionYP_001738643 
Protein GI170288405 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.173614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGTTA TTCAGAGGAT CAAGGAAAAA TACGATGAGT TCACGAATGC AGAGAAAAAA 
ATAGCTGATA CCATCCTTTC TGATCCGAAG GGAATTATAG AGAGTTCCAT CAGCGATCTC
AGCGAAAAAG CAGGTGTGAA GAGTGAAGCT TCCGTCGTGA AGTTTTACAA AAAACTGGGA
TTGAACAGCT TTCAACAGTT CAAGGTGCTT TTGGCTCAGA GCATCTCCAG GGCACCGCTC
GAGATCGTCT ACGAAGATGT CTCGAGTGAG GACGATACGA AAACCATCAC GGAGAAGATA
TTCAAAGCAA CAGTGAGGGC CATCCTGGAT ACACTGAATT GGATGGATGT CGATTCCATC
GAAAAGGCCG TCGATCTGTT TAAAAACGCT CAGAGGATCA TATTCATCGG TTTCGCGGCC
TCGGCAGCTG TTGCGTTTGA TGCGTTTCAC AAATTCACAA GAATAGGAAA GAACTGTCTG
TTTTCTAACG ATGAGCACAT CATAGCAACC ATTCTTGCTA CAGCTTCACC AAACGATCTG
CTGGTTGCCA TTTCGCACAC CGGAGAAACG ATCTCTGTGG TGAACTTCGC TAAAAAAGCG
AAAGAGATGA AAATGCCGGT TGTTGCTATC ACAGGGAATA GAAAATCCAC GCTTGCGAAG
TACTCGAATG TTGTCCTTGC CACCAACACA AAAGAGACGA AAATAAGAAC CGATGCGATG
ACTTCGAGAA TAGTCCAGCT TGTGATTCTC GATACGATAT ACACGCTTTT AGCAGCAAGA
GATCCAAGGG CAATAGAAAT TCTCAACAGG AGTAGACTCG CGGTTTCAGA ATTGAAGTAC
TGA
 
Protein sequence
MDVIQRIKEK YDEFTNAEKK IADTILSDPK GIIESSISDL SEKAGVKSEA SVVKFYKKLG 
LNSFQQFKVL LAQSISRAPL EIVYEDVSSE DDTKTITEKI FKATVRAILD TLNWMDVDSI
EKAVDLFKNA QRIIFIGFAA SAAVAFDAFH KFTRIGKNCL FSNDEHIIAT ILATASPNDL
LVAISHTGET ISVVNFAKKA KEMKMPVVAI TGNRKSTLAK YSNVVLATNT KETKIRTDAM
TSRIVQLVIL DTIYTLLAAR DPRAIEILNR SRLAVSELKY