Gene TRQ2_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0553 
Symbol 
ID6091969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp555285 
End bp556370 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content44% 
IMG OID642487739 
ProductABC-2 type transporter 
Protein accessionYP_001738590 
Protein GI170288352 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCATC TTGTTGTTTC TATTCTGAAA AACGATTACT TCAGAACTAA GAGCGTTCTT 
TTTTGGAATT TCCTTTTTCC AATACTCCTC TATCTCATTC TCGTATCCAT CTTCGGAGAT
ATGTCTTCTA ACATGAACCT GAGGATAGGA CTTGTGGGAG AGAGTAGTTT GGTAGAGAGT
GTGTTCAGCC ATCTCCCATC CGGTATCGAG ATCATCAGAA CACAGAACCC TGAAAGAGAC
CTCAAATACG GAAAGATCGA TGTTTGTGTG ATCCTGCCAG AAAACTTAGA CAATCTTTTC
ACAAAAGCTA TCATCTTTTC CAAAACGAAG ATCTCTGTTC CTGTGGAGAT CACCATTCTT
TACGCTCCGG AGAGGCAGGA ATCCATTGTC CTTGCGAACG TTGTTTCTAA CATACTCGAG
TCGCTTGATC TTCAACTCAG AAAGGTTAAG GAGGTAGAAG TGGAGTACAG AAAAAAAGAA
AGGCAGGCTA TTAATTACTC TCACTACATT CTTCCTGCCG TTCTTCTTGT GGGTGTGATG
TCCGTCGGCC TTTTCACTGT TCCGTATCAG CTCGCTCTCT ACAGAGAGCA GGGAATTTTG
AAAAGAATTC TTGCTTCTCC ACTGAGAGGT CATCACTACT TTTTCTCCAT AGTCGTCTGC
GGACTTTTTG CCATGTCCAT CACTTCCGCT TCTGTGACGC TCTTTGCACG TTTTGTGTAC
GGAATAGAGT TCCCCATCAA TGTATCCTTC TTAGGCGGTG TGCTTCTTTC CTTTCTTACG
TTTCTGAGTG TGTCTCTGCT CATGGTGTCT TTGTTCAAAA CCTTCTCCGC TTTGAGTGCA
GCTTCGCAGG TGTTCAACCA GGTGTTCATG TTCCTCGGAG GTTTTTACTT CGATGTCTCC
GGAATTCCTT GGCCGATCAA AGCGGTTGTT CTTGGAAATC CTGCAACCTA CTTGGTGGAT
TATCTGAGGG GATCTTTCGG ATACAGAACG ATTTACTCGA ATCACTTTTT AGTGCCGATC
GTGTGGATAG TACTCTCTTT AGTTCTCTTT TTTTTGAACT GGAGGAGGGT GATGATGGTT
GAGTGA
 
Protein sequence
MRHLVVSILK NDYFRTKSVL FWNFLFPILL YLILVSIFGD MSSNMNLRIG LVGESSLVES 
VFSHLPSGIE IIRTQNPERD LKYGKIDVCV ILPENLDNLF TKAIIFSKTK ISVPVEITIL
YAPERQESIV LANVVSNILE SLDLQLRKVK EVEVEYRKKE RQAINYSHYI LPAVLLVGVM
SVGLFTVPYQ LALYREQGIL KRILASPLRG HHYFFSIVVC GLFAMSITSA SVTLFARFVY
GIEFPINVSF LGGVLLSFLT FLSVSLLMVS LFKTFSALSA ASQVFNQVFM FLGGFYFDVS
GIPWPIKAVV LGNPATYLVD YLRGSFGYRT IYSNHFLVPI VWIVLSLVLF FLNWRRVMMV
E