| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0310 |
|---|
| Symbol | |
|---|
| ID | 6091714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 293331 |
|---|
| End bp | 294596 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642487488 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_001738350 |
|---|
| Protein GI | 170288112 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGTT CCTTGAGAAG TGACATTAAG GTTGCTCTCA AAAATGGCTT TGTTCATATA
TTTTCTGCAA ATGTCATAAA TAAAATCATT CAGTTTGGAA CTTCTATCGT CGTTGTTAGA
ATCGTATCCA AAGAAATATA TGGACAGTGG TCATACGCTA ACAATGTCTT GAACTTTTTT
CTTTTACTCA GTGGCTTAGG CGTAGCATCT GGCCTTCTAC AGTTTGCAAG TTCTTCGTCT
AATACGATTG ACAAGTTGTC CTACTTAAAA TACAGTCTGA GAGTTGGGCC AAGTTTCAAC
CTGATTGTTG CTATAGCGCT ATTTTGTTTT TCCTGGATTA TCAAACTTCC TCTGGCAGGA
AGCACTGAGA TTTTGAGATG GTTATCATTT GTTCCGTTGT TCACTATCTC TTTCGATATC
ATCCAAAGCT TTCTGAGAGC GGAGCTGAAA AACAAGAAGT TTTCAATCTT AACGGTAGTG
AATACACTCT CTTTGTTTCT CAGCATTCTG GCTCTTGGTT ATTGCTACCA GGTAAAAGGG
CTCATCCTTA GCAGATATAT CGCCTATTCC ATCACATTGA TGGTTGCTGT CTATATAATG
AAACCTTATC TTAGCTTATA CAAAACTGTG TCATTACCTC ACAGGGGAGA TAGAATCCTT
TTCTTGAAGT TTTCCGTCAC AGCTATGCTT TCGAATGTAA TATCCCAAAT TCTTTATCTT
ATAGATGTGC TGTTAATTGG CCTCATTGTG AAATCTGATA CTGTTGTGGC AACATATAGA
ACTTCGACTC TTGTACCTTT TGCCTTGAAT TTCATACCAC TATCAGTTAT CACCTATGTG
TACCCTTACT TTGCCCGCAA AAAAGAGGAC AAACAATGGG TCAAAAAGTA TTATCACCGA
TTGATAAAGT ACCTGTTATT TTTGAACAGT TTCATCTCAA TACTTCTGAT AATCACTGCT
CCACTGGTGA TTAGAATACT ATTCGGTTCC AGATATCTTG ATGCAGTGAC AACATTCAGG
ATACTTGCCT TTGGATATCT AATAGCGGGT ACTTTTAGAA TACCAGCTGG AAACATTCTG
GCGAGTCTGG GGAAAGTAAA AATGAATCTA TGGAATGCAA TCATCAGTGG TAGCGCTAAC
ATAGTGCTGG ATGTACTGTT GATAAAAGCA TACGGTGCTG TAGGAGCAGC TGTAGCTACT
GTTCTTGTTT TCGTAATCTC ATCTTTCGTA TCATACTTGT ATCTCGAGAA GTACTTCAAA
ACTTAA
|
|---|
| Protein sequence | MMSSLRSDIK VALKNGFVHI FSANVINKII QFGTSIVVVR IVSKEIYGQW SYANNVLNFF
LLLSGLGVAS GLLQFASSSS NTIDKLSYLK YSLRVGPSFN LIVAIALFCF SWIIKLPLAG
STEILRWLSF VPLFTISFDI IQSFLRAELK NKKFSILTVV NTLSLFLSIL ALGYCYQVKG
LILSRYIAYS ITLMVAVYIM KPYLSLYKTV SLPHRGDRIL FLKFSVTAML SNVISQILYL
IDVLLIGLIV KSDTVVATYR TSTLVPFALN FIPLSVITYV YPYFARKKED KQWVKKYYHR
LIKYLLFLNS FISILLIITA PLVIRILFGS RYLDAVTTFR ILAFGYLIAG TFRIPAGNIL
ASLGKVKMNL WNAIISGSAN IVLDVLLIKA YGAVGAAVAT VLVFVISSFV SYLYLEKYFK
T
|
|---|
| |