| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0166 |
|---|
| Symbol | |
|---|
| ID | 6091568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 158841 |
|---|
| End bp | 160037 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642487347 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001738210 |
|---|
| Protein GI | 170287972 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00791172 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACATAG CCGTACTCAA TCACTACGCG AGCACACCAG AGATGGGAAG CGCTGAAACG
AGACATTTCG AACTCGCGAA AAGATTCGTA AAGGAAGGTC ACAAGGTGGA TATCTACATC
GGTGATTTTT CGCATCTCAT CGGGAAAAGA TGGAGCGAAA CATTCGGATG GAGTTTTTCT
AAGGACGGCG TGGATTTCAT TGTTGTTGAA ACGAGAGAAT ATATCGGAAA TTCCCTTTCA
AGGCTTCTCT CCTCTATCGA TTATTACAGA AATGGAAGAA AGAAGATCGT TCAGAGAAAC
TACGACGTCA TCATCGCGTC TTCTCCGCAC CCGTTTTCCT GGAGCCTTGG TTGGTATTAC
GTGAAGAAAA AAGGTGGAAG GTTCTTCATC GAGATCAGAG ACGTCTGGCC GGACGATCTT
GTAGAACTTG GTTCTCTGAG CTACCGTCAT CCAGTTTCAA AGCTCTTCGA CCACATGTGC
AAAAAGTATT ATCCGAAAGC AGATGGAATC ATTTCCCTTG TTCCAGATCT TTCCAAGCAC
TTCAACAGAC TGAAGGTTCG ACCAAAAAAT TTCATCTACA TTCCCAACGG TGTTGATCTG
AAGATTTTCG AAGATCCAGA ACCGTGCCCG ATAGTGGATG AACTCTTTTC AAAAGTACCC
GCTGATAAGA TAAAGGTCGT CTACGCGGGA TCCATCGTCG AACATAAGGG GATAAAAGAG
TTCATAGGAA CACTTTCAAA AGTGAGCAAA AGCCTGAGAG ATCTTTTTGT GTTCCTCTTT
GTCGGGCCGT CTCAGGCGGA TTATCTTGTT TCTGTGAAAG AAACGGCGAA AGATCTGCAG
AACGTGTTCT TTTTTGATCC TGTTCCAAAA AGGTGTGTTC CCTACCTTCT TCAGAAGGCA
GATGTTCTCC TCTTCACTCT CTCTCAAACC GTGATGGATC ACCCTGCCGT GAGTTCCTAC
AAAGTGGTAG ATTACATGGC CTCTGGAAAA CCAGTCCTCT GTGTCGATAT CGAAAATCTT
CCCTTCAAGA AAACGAAAGG AGCTGTCTTT TTCAGAGAGG GTAATCTCGA GGAAGCACTG
AGAAAAATCC TCGATGAAAA TCCTTCAGAA TTCGGCAAAA GAAACAGAGA GTATGTGGAG
AGAGAAAGAG ACTGGGATCG GCTTTACGAA AAGTTAAGGA GTTTCGTACT CTCCTGA
|
|---|
| Protein sequence | MNIAVLNHYA STPEMGSAET RHFELAKRFV KEGHKVDIYI GDFSHLIGKR WSETFGWSFS
KDGVDFIVVE TREYIGNSLS RLLSSIDYYR NGRKKIVQRN YDVIIASSPH PFSWSLGWYY
VKKKGGRFFI EIRDVWPDDL VELGSLSYRH PVSKLFDHMC KKYYPKADGI ISLVPDLSKH
FNRLKVRPKN FIYIPNGVDL KIFEDPEPCP IVDELFSKVP ADKIKVVYAG SIVEHKGIKE
FIGTLSKVSK SLRDLFVFLF VGPSQADYLV SVKETAKDLQ NVFFFDPVPK RCVPYLLQKA
DVLLFTLSQT VMDHPAVSSY KVVDYMASGK PVLCVDIENL PFKKTKGAVF FREGNLEEAL
RKILDENPSE FGKRNREYVE RERDWDRLYE KLRSFVLS
|
|---|
| |