| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0139 |
|---|
| Symbol | |
|---|
| ID | 6091541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 134832 |
|---|
| End bp | 136106 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642487320 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_001738183 |
|---|
| Protein GI | 170287945 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA TGGAAATGGC CAGAAAGGGT GTTGTTTCCG ACGAGATGAA AAAGGTGGCG
GAGTACGAGG GAGTGGATGT CGAGATCGTC AGGCAAAAAC TTGCGGAAGG CAGAGCGGTT
CTTCCAAAGA ACAAACTCCA CAGGATAGAA AGGCCAATGA TCGTTGGAGA AGGTTTCAGT
GTGAAGGTGA ACGCGAACAT AGGAACCTCC CAGGGATTTT CTTCGCTCGA AGAGGAAAAG
GAAAAGGCAA GGGTAGCGAT AGAATACGGT GCTGACTCCC TCATGGTTCT TTCCACGTGG
GGAGACCTGA GGGAGATCAG AAGGGCCATC GTGGAGATGT CGCCCGTTCC AGTTGGTTCG
GTGCCCATAT ACGATTCCGC CGTGAGGAGT TACCAGATGA AAAAGAACGT GGTGGATTTT
TCGGAGAAGG ACTTCTTCGA TATGGTCATA GCACACGCGG AAGATGGCAT AGACTTTATG
ACGATCCACG TCGGTGTGAC GAGAAGGGTG CTTGATAGGA TAAAAAGTTC AAGGCGGGTT
TTGAAGATCG TGAGCAGAGG AGGAGCGATC ATCGCGGGAT GGATGATAAA GAACAACAGG
GAAAATCCGT TCTACGAACA CTTCGATGAA CTCTTGGACA TTGCAAAAGA CTACGATATC
ACTCTGAGTC TTGGCGACGG CATGAGACCC GGAGCTGTGG TGGATGCGAG CGACGCCCAG
CAGTTCGAAG AGCTGTTCGT GATGGGGGAA CTCGTGGAGA AAGCGAGGGA AAAAGGGGTC
CAGGTGATGC TGGAAGGGCC GGGGCACGTT CCACTGAACG AGGTGGAGAT GAACGTGAGG
CTCATGAAAA AGATCGGAAA AGGAGCCCCC ATCTTCCTTC TGGGACCTCT TCCAACGGAC
AGAGCCATGG GCTACGATCA CATAGCCTGC GCGATAGGTG GTGCGCTGGC TGGCTACTAC
GGAGCCGATT TCCTCTGTTA TGTAACTCCT TCAGAGCACA TCTCGCTTCC GGATGTTGAA
GACGTGAGAG AAGGTGTGAT AGCCTCTAAG ATAGCGGCTA TTGTCGCGGA TGTGGCGCGC
GGAAACAAAA AAGCCTGGGA GCTTGAGAAA AAGATGGCCC TCGCAAGAAA GAACTTCGAC
TGGGAGACGA TGTTCAGCCT TTCGCTGGGA AAGGACGTTG CGAAGAAGAA ATACGAGGAA
AGACCGTACC CCGACAAAGG CTGTTCTATG TGTGGACCAT TCTGTGCGAT AAAGATAGCG
GAGGAGTTCT CTTGA
|
|---|
| Protein sequence | MTQMEMARKG VVSDEMKKVA EYEGVDVEIV RQKLAEGRAV LPKNKLHRIE RPMIVGEGFS
VKVNANIGTS QGFSSLEEEK EKARVAIEYG ADSLMVLSTW GDLREIRRAI VEMSPVPVGS
VPIYDSAVRS YQMKKNVVDF SEKDFFDMVI AHAEDGIDFM TIHVGVTRRV LDRIKSSRRV
LKIVSRGGAI IAGWMIKNNR ENPFYEHFDE LLDIAKDYDI TLSLGDGMRP GAVVDASDAQ
QFEELFVMGE LVEKAREKGV QVMLEGPGHV PLNEVEMNVR LMKKIGKGAP IFLLGPLPTD
RAMGYDHIAC AIGGALAGYY GADFLCYVTP SEHISLPDVE DVREGVIASK IAAIVADVAR
GNKKAWELEK KMALARKNFD WETMFSLSLG KDVAKKKYEE RPYPDKGCSM CGPFCAIKIA
EEFS
|
|---|
| |