| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4081 |
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| Symbol | |
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| ID | 6065604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4505774 |
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| End bp | 4507915 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641603503 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_001727006 |
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| Protein GI | 170022052 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAA AACCGGCAGC GCGTCAGGGC GACATGACGC AGTATGGCGG TAGCATTGTT
CAGGGTTCAG CCGGGGTGCG CATTGGTGCC CCCACCGGCG TGGCCTGTTC GGTGTGCCCC
GGCGGAGTGA CGTCCGGCCA TCCGGTCAAT CCCCTGCTCG GTGCAAAGGT CCTTCCCGGT
GAAACCGACA TCGCCCTGCC CGGCCCGCTG CCGTTCATCC TCTCCCGCAC CTACAGCAGT
TACCGGACAA AAACGCCCGC GCCGGTGGGG AGCCTCGGCC CCGGCTGGAA AATGCCTGCG
GATATCCGCT TACAGCTGCG CGATAATACA CTGATACTCA GTGATAACGG CGGCAGAAGC
CTGTATTTTG AGCACCTGTT TCCCGGTGAG GACGGTTACA GCCGCAGCGA GTCACTGTGG
CTGGTGCGCG GCGGCGTCCT GAGACTGGAT GAAGGTCACC GGCTGGCCGC ACTCTGGCAG
GCGCTGCCGG AAGAACTCCG CTTAAGTCCG CATCGTTATC TGGCGACAAA CAGTCCGCAG
GGGCCGTGGT GGCTGCTCGG CTGGTGTGAG CGGGTGCCGG AAGCGGATGA GGTGCTGCCT
GCGCCGCTGC CGCCGTACCG GGTACTGACC GGGCTGGTGG ACCGCTTCGG GCGCACACAG
ACGTTCCACC GCGAAGCCGC CGGTGAATTC AGCGGCGAAA TCACCGGCGT GACGGATGGT
GCCGGGCGTC ACTTCCGGCT GGTACTGACC ACGCAGGCGC AGCGGGCAGA AGAAGCCCGG
CAGCAGGCCA TTTCCGGCGG GACGGAACCG TCCGCTTTTC CTGATACCCT GCCGGGTTAC
ACCGAATATG GCCGGGACAA CGGCATCCGT CTGTCTGCCG TGTGGCTGAC GCACGACCCG
GAATACCCGG AGAATTTACC TGCCGCGCCG CTGGTACGCT ATGGCTGGAC GCCGCGCGGC
GAACTGGCGG TGGTGTATGA CCGTAGTGGC AAACAGGTGC GCAGCTTTAC TTACGATGAT
AAATACCGGG GCCGGATGGT GGCGCACCGT CACACGGGCC GGCCGGAAAT CCGTTACCGT
TACGACAGCG ACGGGCGGGT GACAGAACAG CTAAACCCGG CAGGCTTAAG CTACACGTAT
CAGTATGAGA AAGACCGCAT CACCATCACC GACAGCCTGA ACCGCCGTGA AGTCCTGCAT
ACCGCAGGCG AAGGCGGGCT GAAGCGGGTG GTGAAAAAGG AACACGCGGA CGGCAGCGTC
ACGCAGAGTC AGTTTGACGC GGTGGGCAGG CTCAGGGCAC AGACGGATGC CGCAGGCAGG
ACAACAGAAT ACAGCCCGGA TGTGGTGACG GGCCTCATCA CGCGCATCAC CACGCCGGAT
GGCAGGGCAT CGGCGTTTTA CTATAACCAC CACAGCCAGT TAACGTCAGC CACCGGGCCT
GACGGGCTGG AAATACGCCG GGAATACGAT GAATGGGGTA ACCAGCTGAA TGAAGAGAAC
CCGCACCAGC TGCAGCAGCT CATCCGCCTG CCGGGGCAGC AGTATGATGA GGAGTCCGGC
CTGTATTATA ACCGCCACCG CTATTATGAC CCGCTGCGGG GGAGGTATAT CACTCAGGAT
CCGATTGGGC TGAAGGGGGG ATGGAACCTG TATACATATC CGCTGAGCCC GGTGAATAGC
ATGGATCCAT TAGGATTATA TGAATTTAAA TCAAAAAATA TAGATGATAT TGGAATATTT
GCATTGGCAA TGTGTAATGG AGAATCAATT AACGAGAATA AAGAATATGG TGGACTAATA
TGTAAGAAGC AAGGTGAATA TTTCCCCATG AATCCGATAA GTTCAAATGA TAATGATAGT
GTAGACTTGC GAAATATAAA ATGCCCTGAA GGTTCAGAGA GAGTAGGCGA TTATCACACT
CACGGTTTTT ACTCTGACGA TAAAGGAAAT AAAGTAACAA AAGAAAATGA TGTTTATGAT
AGTCTAAATT TTTCAAGCAA AGATTTAACG AATTCTTATA TGAATGGAAT GGGAAAAAAA
GAATACAGTA GTTACTTGGG AACACCAAAT GACACCTATC TAAAATATAA TCCCAAAGCT
AAAGGGAATG GAGTTACAAT TATCAGGCAA GGGAGTAATT AA
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| Protein sequence | MSGKPAARQG DMTQYGGSIV QGSAGVRIGA PTGVACSVCP GGVTSGHPVN PLLGAKVLPG
ETDIALPGPL PFILSRTYSS YRTKTPAPVG SLGPGWKMPA DIRLQLRDNT LILSDNGGRS
LYFEHLFPGE DGYSRSESLW LVRGGVLRLD EGHRLAALWQ ALPEELRLSP HRYLATNSPQ
GPWWLLGWCE RVPEADEVLP APLPPYRVLT GLVDRFGRTQ TFHREAAGEF SGEITGVTDG
AGRHFRLVLT TQAQRAEEAR QQAISGGTEP SAFPDTLPGY TEYGRDNGIR LSAVWLTHDP
EYPENLPAAP LVRYGWTPRG ELAVVYDRSG KQVRSFTYDD KYRGRMVAHR HTGRPEIRYR
YDSDGRVTEQ LNPAGLSYTY QYEKDRITIT DSLNRREVLH TAGEGGLKRV VKKEHADGSV
TQSQFDAVGR LRAQTDAAGR TTEYSPDVVT GLITRITTPD GRASAFYYNH HSQLTSATGP
DGLEIRREYD EWGNQLNEEN PHQLQQLIRL PGQQYDEESG LYYNRHRYYD PLRGRYITQD
PIGLKGGWNL YTYPLSPVNS MDPLGLYEFK SKNIDDIGIF ALAMCNGESI NENKEYGGLI
CKKQGEYFPM NPISSNDNDS VDLRNIKCPE GSERVGDYHT HGFYSDDKGN KVTKENDVYD
SLNFSSKDLT NSYMNGMGKK EYSSYLGTPN DTYLKYNPKA KGNGVTIIRQ GSN
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