Gene EcolC_3911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3911 
Symbol 
ID6064392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4296539 
End bp4297300 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content41% 
IMG OID641603325 
ProductAraC family transcriptional regulator 
Protein accessionYP_001726840 
Protein GI170021886 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.508858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATTT GCAGCGACCA ACCTTGTATT GTTTTATTGA CTGAAAAAGA TGTCTGGATA 
AGGGTGAATG GGAAAGAACC TATTAGCCTT AAAGCTAACC ATATGGCGTT ATTAAATTGT
GAAAATAATA TTATCGACGT CTCCTCTCTT AACAACACTT TGGTTGCTCA TATTAGTCAC
GACATCATCA AAGATTACCT CCGGTTTCTG AATAAAGATC TCTCGCAAAT ACCAGTATGG
CAACGTAGCG CTACGCCCAT ACTCACCCTG CCATGCCTGA CGCCAGACGT CTTTCGCGTT
GCCGCGCAAC ACAGCATGAT GCCCGCAGAA ACTGAGTCAG AAAAGGAACG AACACGCGCA
TTATTATTCA CGGTGCTATC CCGTTTTCTC GACAGTAAAA AATTCCTTTC ATTAATGATG
TATATGTTAC GTAATTGTGT AAGTGACAGC GTTTATCAAA TTATTGAAAG CGATATTCAC
AAAGACTGGA ATCTTAGTAT GGTAGCCAGT TGTTTATGTC TTAGCCCAAG TCTGTTAAAG
AAAAAGTTGA AAAGCGAAAA CACCAGTTAT AGCCAAATAA TCACCACCTG CCGCATGCGT
TATGCCGTAA ATGAATTAAT GATGGACGGT AAAAATATCT CTCAGGTATC ACAGTCCTGC
GGCTACAACA GTACGTCGTA CTTTATTTCT GTCTTTAAAG ACTTCTACGG TATGACGCCG
CTGCATTATG TTAGTCAGCA CAGAGAACGC ACTGTCGCCT GA
 
Protein sequence
MRICSDQPCI VLLTEKDVWI RVNGKEPISL KANHMALLNC ENNIIDVSSL NNTLVAHISH 
DIIKDYLRFL NKDLSQIPVW QRSATPILTL PCLTPDVFRV AAQHSMMPAE TESEKERTRA
LLFTVLSRFL DSKKFLSLMM YMLRNCVSDS VYQIIESDIH KDWNLSMVAS CLCLSPSLLK
KKLKSENTSY SQIITTCRMR YAVNELMMDG KNISQVSQSC GYNSTSYFIS VFKDFYGMTP
LHYVSQHRER TVA