| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3384 |
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| Symbol | |
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| ID | 6067568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 3703400 |
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| End bp | 3704386 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641602798 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001726330 |
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| Protein GI | 170021376 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.399889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC TTATTGCAAC TGCCGCTTCC AGCATTAACG CTTTTACTCT GGCAAAGCGT
GTCGCCGCAT TTAACGTGCC GGTGCTCATT CAGGGCGAAA CCGGCGCGGG CAAAGAATGC
GTGGCGAAAT ATATTCACAC CGTAGCCTTT GGTGAAAATG ATAACGCGCC CTATATCGGC
GTGAACTGCG CGGCGATCCC AGAAAATATG CTGGAAGCGA CCTTATTTGG CTACGACAAA
GGCGCATTTA CCGGCGCAAT TGCCAGCGTA CCTGGAAAAA TGGAACTGGC GAATAACGGC
ACCTTATTGC TCGATGAAAT TGGCGATATG CCGCTGGCAT TACAGGCCAA AATATTACGC
GTATTGCAGG AACAGCTGGT TGAGCGATTA GGCAGCAACC GACAAATTAA ACTCAATTTT
CGCCTGATTG CCTGCACCAA TAAAAACCTT GAACAGGAAG TCGCTGCCGG GCGTTTTCGT
GAAGATCTCT ATTATCGCCT GGCGGTTATT CCTATTACCA TGCCGCCGCT GCGTGAACGT
CTGAACGATA TTATTCCGCT GGCAGAGTCA TTTATTAAAA AATACTCCAC GGTGCTGGTG
AAAAATATCA CCCTTTCAGA ATCTACCCGC CGGGCGCTGC TCAATTACCG CTGGCCCGGC
AACGTGCGCC AGCTGGAGAA CGCCATACAG CGGGGAATGA TCTTAAACCG CGACGGCGTA
ATTTACCTCG ATGCGTTAGG CCTGCCGGAA AATGACATTG CCGACCGCAG CGAACTGCAA
TGGCCTGTTC AGCCCGCCGT CCACATTGCC GAAACCAGCG ATTTGGGCCA GCACGGACGA
AGCGCCCAGT ATCAATATAT CGCTGACCTG ATGCGTAAAT ATCAGGGCAA CCGCAGCAAA
ATCGCCGACC TGTTAGGCAT TACCCCGCGC GCACTGCGCT ATCGACTGGC CTCCATGCGC
AAGCAAGGTA TCGAAGTTTT CTCCTGA
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| Protein sequence | MSELIATAAS SINAFTLAKR VAAFNVPVLI QGETGAGKEC VAKYIHTVAF GENDNAPYIG
VNCAAIPENM LEATLFGYDK GAFTGAIASV PGKMELANNG TLLLDEIGDM PLALQAKILR
VLQEQLVERL GSNRQIKLNF RLIACTNKNL EQEVAAGRFR EDLYYRLAVI PITMPPLRER
LNDIIPLAES FIKKYSTVLV KNITLSESTR RALLNYRWPG NVRQLENAIQ RGMILNRDGV
IYLDALGLPE NDIADRSELQ WPVQPAVHIA ETSDLGQHGR SAQYQYIADL MRKYQGNRSK
IADLLGITPR ALRYRLASMR KQGIEVFS
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