Gene EcolC_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3379 
Symbol 
ID6067543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3698361 
End bp3699698 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content61% 
IMG OID641602793 
ProductFliI/YscN family ATPase 
Protein accessionYP_001726325 
Protein GI170021371 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.424173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATT TTTCTGCGTT CGATAACGCC CTGCGCTCGC TGGAGTCGAT CCCGCTGGCC 
CGCGTCGCCG GGCGGCTGGT GCGCCTTAAC GGCATCCTGC TGGAGAGTGT CGGCTGCCCG
CTAATGACCG GGCAGCTGTG CCGCATCGAA AGTGCCAATC ACACGCTGAT CGACGCGCAG
GCCGTGGGCT TTAATCGCGA CATCACCTAT TTAATGCCGT TTAAACAGCC GGTCGGCCTG
ATGGCAGGCG CACGCGTCTT CCCGGAAGAA AAAGCCCACG ACATCCTGAT AGGCGAAAGC
TGGTTAGGCC GCGTGGTGAA TGGCCTCGGC GAACCGCTGG ATGGCAAAGG CCGCCTGAAC
GGCAACGACC TTCTGCCGCC GTTGCCGCCC TCGGTTAATC CCTTAACTCG TCGTTCGGTA
GACGAACCGC TGGACGTGGG CGTGAAAGCG ATCAACGGCC TGCTGACCAT CGGCAAAGGC
CAGCGCGTCG GACTAATGGC AGGCAGCGGC GTCGGGAAAA GCGTGCTGCT GGGGATGATC
ACCCGCCAGA CCAAAGCCGA TATCGTGGTG GTTGGGCTGA TTGGGGAACG CGGGCGCGAA
GTGAAAGAGT TTATCGACCA CTCGCTGGGC GCGGACGGGC TGGCAAAGTC TATCGTCGTC
GTCGCGCCTG CCGATGAATC GCCGCTGATG CGTCTGAAAG CCACCGAACT GTGCCACTCC
ATCGCCGCCT GGTTTCGCGA CCGCGGGCAT CACGTCTTAC TGCTGGTGGA TTCCCTGACC
CGCTACGCGA TGGCGCAGCG GGAAATCGCC CTCTCGCTCG GCGAACCGCC CGCCACCAAA
GGTTATCCGC CATCGGCATT CGGCATGATC CCCAAACTGG TCGAAAGCGC AGGCAACAGC
GAAAGCGCGG GATCGATGAC CGCCATCTAC ACCGTGCTGG CGGAAGGTGA CGACCAGCAA
GATCCGATTG TCGACTGCGC GCGCGCGGTG CTGGACGGGC ATATCGTATT AACCCGCAAA
CTGGCGGAAG CGGGGCACTA TCCGGCCATT GATATCGGCC AGTCGATCAG CCGCTGCATG
AACCAGGTCA CCAGCCTGGA ACATCAGCAA TCCGCCCGCG CGTTAAAGCA AAACTATGCC
GCCTATATGG AGATCAAACC TCTGATCCCG CTCGGCGGCT ATGTGGCAGG TGCCGACGCC
AGCGTCGACA AAGCGGTGAA AATGTTTCCG GCCATTGAGC GATTTTTGCG CCAGGAGATG
CGCGAACCCG CCTCCCTCGA ACTGGTGCAA AGCCGCCTGC AAATTCTCTT TCCTGGTGTC
AAAAAGGCAG AACAGTAA
 
Protein sequence
MSDFSAFDNA LRSLESIPLA RVAGRLVRLN GILLESVGCP LMTGQLCRIE SANHTLIDAQ 
AVGFNRDITY LMPFKQPVGL MAGARVFPEE KAHDILIGES WLGRVVNGLG EPLDGKGRLN
GNDLLPPLPP SVNPLTRRSV DEPLDVGVKA INGLLTIGKG QRVGLMAGSG VGKSVLLGMI
TRQTKADIVV VGLIGERGRE VKEFIDHSLG ADGLAKSIVV VAPADESPLM RLKATELCHS
IAAWFRDRGH HVLLLVDSLT RYAMAQREIA LSLGEPPATK GYPPSAFGMI PKLVESAGNS
ESAGSMTAIY TVLAEGDDQQ DPIVDCARAV LDGHIVLTRK LAEAGHYPAI DIGQSISRCM
NQVTSLEHQQ SARALKQNYA AYMEIKPLIP LGGYVAGADA SVDKAVKMFP AIERFLRQEM
REPASLELVQ SRLQILFPGV KKAEQ