Gene EcolC_3264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3264 
Symbol 
ID6065013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3573861 
End bp3574532 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content44% 
IMG OID641602679 
ProductLmbE family protein 
Protein accessionYP_001726213 
Protein GI170021259 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAAGG TTTTAGATTC AGCCCTCCTT TCTTCGGCAA ATAAAAGAAA GGGTATCCTT 
GCTATTGGCG CACATCCTGA CGATATAGAA TTAGGCTGTG GCGCATCGCT TGCTCGTCTT
GCGCAAAAAG GAATTTATAT CGCAGCCGTG GTGATGACTA CCGGCAACTC TGGCACAGAT
GGAATAATCG ATCGCCATGA AGAATCGCGC AACGCCCTAA AGATATTAGG GTGCCACCAA
ACTATTCATC TTAATTTTGC TGACACCCGC GCTCATTTAC AGCTCAATGA TATGATTTCC
GCCCTGGAAG ACATCATTAA AAATCAAATT CCTTCTGATG TTGAAATCAT GCGGGTATAT
ACCATGCATG ATGCCGACCG CCATCAGGAT CATCTCGCTG TTTATCAAGC TTCAATGGTT
GCCTGCCGCA CTATTCCACA AATTCTCGGC TACGAAACCC CAAGTACCTG GCTTTCATTT
ATGCCTCAGG TTTTTGAATC CGTTAAAGAA GAATATTTCA CAGTCAAACT TGCTGCATTA
AAAAAACATA AAAGCCAGGA ACGACGCGAT TATATGCGTC ATGATCGCCT GCGTGCAGTT
GCACAATTTC GCGGGCAACA GGTCAATAGC GATCTGGGTG AAGGCTTTGT AATTCATAAA
ATGATTCTTT GA
 
Protein sequence
MDKVLDSALL SSANKRKGIL AIGAHPDDIE LGCGASLARL AQKGIYIAAV VMTTGNSGTD 
GIIDRHEESR NALKILGCHQ TIHLNFADTR AHLQLNDMIS ALEDIIKNQI PSDVEIMRVY
TMHDADRHQD HLAVYQASMV ACRTIPQILG YETPSTWLSF MPQVFESVKE EYFTVKLAAL
KKHKSQERRD YMRHDRLRAV AQFRGQQVNS DLGEGFVIHK MIL