Gene EcolC_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3176 
Symbol 
ID6065747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3481272 
End bp3482483 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content48% 
IMG OID641602592 
Productputative capsular polysaccharide bisynthesis protein 
Protein accessionYP_001726126 
Protein GI170021172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT TGAAGAGTGC TTCCACTATT GCCGGGTCGT CAGTCATTTC GCAACTGATT 
GGCGCCTTCT CAATCTGGTT AATCTCGTAT AAATACGATC TCGCGGAAGT GGGCCTGTAT
GCGCTCAATT ACAGTATCGC TGTGATCGGA GCGCAGGTAT GTACCTTTGC GTCCCAATTG
CTTATTCCTA AACAATCGGA AGAAGAGTTA ACGCAAAATG TGGTGTTTTG CCTTCTGCAA
AGCGCGATTC TGGCGCTGCC TTACGCGCTA CTGACGGCGT GGCTATTCCA TCAAAACGTG
CTGTTTCTCT ATCTGTTATC GCTGTCGAAC GCATGGGTTC TGATATCGGA AAACCTGTCA
CTGCGCACGG GTAATTTCCG GTTTCTCATC TTCCAGCGTA TTTCGGTGTC AGTCGTCGTG
GTGCTGTCTG TTGTACTGAC GAATCAGGTT CAGATGTTTT ACTGGACCTG GGCCAGCGGC
ATGATGCTGC TAACCATCAG TTGTATCGCG CGATCTTTTA ATTTCCGTAC GGTCACGGCG
CAGCATCTGT CCCTGAAAAG CAACCTGGTG TTTTTCAGGA CGCATTTTCA CCATATTTCG
CGAGTCGGGA GTGCCGAAGT ATTGGCGATG GCTAACAATA ATCTGCCGAT CATGCTCATA
AACTTTTGGT TTTCGGCATT AACGGCGGGC TATTTTTCCG TGGTCAGTCG CTTCTGTCTG
TCACCGGTGA CCATTGTCGG GAATGCGGTG CGTAATACCA TTTTCTCAAA GTGGTCGATC
GACTTCAGAA ATAACACGTT TAACTATCCG GAATACCAGC GGGTTCGTTT CCTGCTGATG
GTGCTCGGGG TGATATGTAC CCTGGGGGTG TTTATTTTTT ATCCTATTGT GATGCATCTT
GGTTTCGGTG AGGACTGGAT CAATTCCATT GATACCTCGC GTTATATGCT GCCCTATCTA
TTCCCGGCGC TGGCGGTCAG TCCTCTCACC GTCATCGAAC TGATTTTTGG ATCACACCGA
TATTTCCTGC GTATTCAGCT GGAACAACTG GCAATCGTAC TGATCGCTTT TGTAGTGACG
CCTTATTTCT ATAACGACTA TGCCACCTCG GTGATTATTT TCTCCGTTCT GACGTTTATT
CGTTATGCAT TCATTTATCT GGCGATGAAT AAACGTGCGA CGCTTTTGAA GAACAACCCG
GTGATGCCAT GA
 
Protein sequence
MSLLKSASTI AGSSVISQLI GAFSIWLISY KYDLAEVGLY ALNYSIAVIG AQVCTFASQL 
LIPKQSEEEL TQNVVFCLLQ SAILALPYAL LTAWLFHQNV LFLYLLSLSN AWVLISENLS
LRTGNFRFLI FQRISVSVVV VLSVVLTNQV QMFYWTWASG MMLLTISCIA RSFNFRTVTA
QHLSLKSNLV FFRTHFHHIS RVGSAEVLAM ANNNLPIMLI NFWFSALTAG YFSVVSRFCL
SPVTIVGNAV RNTIFSKWSI DFRNNTFNYP EYQRVRFLLM VLGVICTLGV FIFYPIVMHL
GFGEDWINSI DTSRYMLPYL FPALAVSPLT VIELIFGSHR YFLRIQLEQL AIVLIAFVVT
PYFYNDYATS VIIFSVLTFI RYAFIYLAMN KRATLLKNNP VMP