Gene EcolC_3029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3029 
Symbol 
ID6065185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3307665 
End bp3309197 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content56% 
IMG OID641602445 
Productcitrate lyase, alpha subunit 
Protein accessionYP_001725980 
Protein GI170021026 
COG category[C] Energy production and conversion 
COG ID[COG3051] Citrate lyase, alpha subunit 
TIGRFAM ID[TIGR01584] citrate lyase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA AAATTGAACA ATCTCAACGA CAAGAACGGG TAGCGGCCTG GAATCGTCGC 
GCTGAATGCG ATCTTGCCGC TTTCCAGAAC TCACCAAAGC AAACCTACCA GGCTGAAAAA
GCGCGCGATC GCAAACTGTG CGCCAACCTG GAAGAAGCGA TTCGTCGCTC TGGTTTACAG
GACGGCATGA CGGTTTCCTT CCATCACGCT TTCCGTGGCG GTGACCTGAC CGTCAATATG
GTGATGGACG TCATCGCGAA GATGGGCTTT AAAAACCTGA CCCTGGCGTC CAGCTCCCTG
AGTGATTGCC ATGCGCCGCT GGTAGAACAC ATTCGCCAGG GCGTGGTTAC CCGCATTTAT
ACCTCCGGCC TGCGTGGTCC ACTGGCGGAA GAGATCTCCC GTGGTCTGCT GGCGGAACCG
GTGCAGATCC ACTCTCACGG CGGACGTGTG CATCTGGTAC AGAGCGGCGA ACTGAATATC
GACGTGGCTT TCCTCGGCGT CCCGTCCTGT GATGAATTCG GTAATGCCAA CGGCTACACC
GGTAAAGCCT GCTGCGGCTC CCTCGGCTAT GCAATGGTTG ATGCCGACAA CGCAAAACAG
GTTGTGATGC TTACCGAAGA ACTGCTGCCT TATCCGCATA ATCCGGCAAG CATTGAGCAA
GATCAGGTTG ATCTGATCGT CAAAGTTGAT CGCGTTGGCG ATGCTGCAAA AATCGGCGCT
GGCGCTACCC GTATGACCAC TAACCCGCGC GAACTGCTTA TTGCCCGTAG CGCTGCGGAT
GTGATTGTCA ACTCTGGCTA CTTCAAAGAA GGTTTCTCCA TGCAAACCGG CACCGGCGGC
GCATCGCTGG CGGTAACCCG TTTCCTGGAA GACAAAATGC GTAGCCGCGA TATTCGCGCC
GACTTCGCCC TTGGCGGTAT TACCGCGACG ATGGTTGACC TGCACGAAAA AGGTCTGATC
CGCAAACTGC TGGATGTGCA GAGCTTTGAC AGCCATGCTG CGCAATCGCT GGCCCGTAAC
CCCAATCACA TCGAAATCAG CGCCAACCAG TACGCTAACT GGGGTTCGAA AGGCGCATCG
GTTGATCGTC TCGACGTGGT GGTACTGAGC GCGCTGGAAA TTGACACCCA GTTCAACGTT
AACGTGCTGA CCGGCTCTGA CGGCGTACTG CGTGGTGCTT CCGGTGGTCA CTGCGATACC
GCAATTGCCT CTGCGCTTTC CATCATCGTC GCGCCGCTGG TACGCGGTCG TATTCCGACT
CTGGTGGATA ACGTGCTGAC CTGCATCACC CCGGGCTCCA GTGTCGATAT TCTGGTCACA
GACCACGGTA TCGCAGTTAA CCCGGCACGT CCGGAACTGG CAGAACGTCT GCAGGAAGCG
GGCATTAAAG TGGTTTCCAT TGAGTGGCTG CGCGAACGTG CGCGTCTGCT GACCGGTGAA
CCACAGCCGA TTGAATTCAC CGACCGCGTC GTTGCCGTTG TGCGTTACCG CGATGGCTCG
GTGATCGATG TTGTGCATCA GGTGAAGGAA TAA
 
Protein sequence
MTQKIEQSQR QERVAAWNRR AECDLAAFQN SPKQTYQAEK ARDRKLCANL EEAIRRSGLQ 
DGMTVSFHHA FRGGDLTVNM VMDVIAKMGF KNLTLASSSL SDCHAPLVEH IRQGVVTRIY
TSGLRGPLAE EISRGLLAEP VQIHSHGGRV HLVQSGELNI DVAFLGVPSC DEFGNANGYT
GKACCGSLGY AMVDADNAKQ VVMLTEELLP YPHNPASIEQ DQVDLIVKVD RVGDAAKIGA
GATRMTTNPR ELLIARSAAD VIVNSGYFKE GFSMQTGTGG ASLAVTRFLE DKMRSRDIRA
DFALGGITAT MVDLHEKGLI RKLLDVQSFD SHAAQSLARN PNHIEISANQ YANWGSKGAS
VDRLDVVVLS ALEIDTQFNV NVLTGSDGVL RGASGGHCDT AIASALSIIV APLVRGRIPT
LVDNVLTCIT PGSSVDILVT DHGIAVNPAR PELAERLQEA GIKVVSIEWL RERARLLTGE
PQPIEFTDRV VAVVRYRDGS VIDVVHQVKE