| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2758 |
|---|
| Symbol | |
|---|
| ID | 6064768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3031163 |
|---|
| End bp | 3031696 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641602164 |
|---|
| Product | tail collar domain-containing protein |
|---|
| Protein accession | YP_001725713 |
|---|
| Protein GI | 170020759 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000977256 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCAG TTAGCCGTAA TCTCTGCATT TTCATAAACG TTGGTTTGGG AGAAGGCTCA
GCATTACCCG TTGGCGTGCC TGTTCCGTGG CCTTCCGCCA CTCCGCCAAC AGGCTGGCTG
AAATGCAACG GTGCGGCTTT TTCTGCTGAA GAATACCCGG AACTGGCAAA GGCTTACCCG
ACAAATAAAT TACCTGATTT ACGCGGTGAG TTTATTCGGG GCTGGGATGA CGGGCGTGGA
GTGGATAACG GAAGGGGATT ATTAACGCTT CAGGATGGTG CTATTGTCAG TCATAACCAC
TATTGGGGAA TCTGGACTTC ACGAACTAAC GACCAGACTC TGGAAAGTTT TACAGGCACC
ACGATTTTAA AACAAATCAC GCCCCTGTCT CCGTCCATTG ACTTCGATAA TTACCCAATT
CCCAACCCGG CTATTACAGA GGGTGGTGTT GTTGCGGCAA CGACTAAACC TGCAGGTGCG
AATGAAACAC GCCCACGAAA TGTCGCTTTT AACTATATTG TGAGGGCTGC ATAA
|
|---|
| Protein sequence | MMPVSRNLCI FINVGLGEGS ALPVGVPVPW PSATPPTGWL KCNGAAFSAE EYPELAKAYP
TNKLPDLRGE FIRGWDDGRG VDNGRGLLTL QDGAIVSHNH YWGIWTSRTN DQTLESFTGT
TILKQITPLS PSIDFDNYPI PNPAITEGGV VAATTKPAGA NETRPRNVAF NYIVRAA
|
|---|
| |