| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2652 |
|---|
| Symbol | |
|---|
| ID | 6064807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2905703 |
|---|
| End bp | 2906413 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641602059 |
|---|
| Product | putativi pili assembly chaperone |
|---|
| Protein accession | YP_001725609 |
|---|
| Protein GI | 170020655 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000294251 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00357409 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATA CGTGGAACAG ATTGGCGCTC TTGATTTTCG CCGTTTTATC GCTGCTGGTG
GCGGGTGAAT TGCAGGCAGG AGTGGTGGTC GGCGGAACGC GATTTATCTT TCCGGCAGAC
AGAGAATCGA TATCTATTTT ACTGACTAAT ACCAGTCAGG AATCCTGGTT TATTAACAGT
AAAATCAACC GCCCAACGCG TTGGGCCGGG GGGGAAGCGT CGACAGTGCC AGCACCATTA
CTGGCCGCTC CGCCACTTAT TCTCCTGAAG CCCGGTACGA CAGGCACGTT GCGCTTGCTG
AGAACGGAAA GCGACATCTT GCCTGTGGAT CGCGAAACGC TATTTGAGTT AAGCATTGCC
AGCGTGCCAT CCGGCAAAGT TGAAAATCAG AGCGTAAAAG TGGCGATGCG CTCGGTATTT
AAACTGTTCT GGCGACCCGA AGGTTTGCCG GGCGACCCGC TGGAAGCTTA TCAACAATTA
CGCTGGACAC GGAATTCGCA GGGTGTACAA CTCACTAACC CAACGCCTTA TTACATTAAC
CTGATTCAGG TGAGTGTAAA TGGTAAAGCG TTAAGTAATG TGGGAGTTGT GCCGCCTAAA
AGCCAGCGTC AGACAAGCTG GTGTCAGGCA ATCGCACCGT GTCATGTCGC CTGGCGGGCG
ATAAATGATT ACGGCGGGTT GAGTGCAAAG AAGGAGCAAA ATCTGCCCTG A
|
|---|
| Protein sequence | MTNTWNRLAL LIFAVLSLLV AGELQAGVVV GGTRFIFPAD RESISILLTN TSQESWFINS
KINRPTRWAG GEASTVPAPL LAAPPLILLK PGTTGTLRLL RTESDILPVD RETLFELSIA
SVPSGKVENQ SVKVAMRSVF KLFWRPEGLP GDPLEAYQQL RWTRNSQGVQ LTNPTPYYIN
LIQVSVNGKA LSNVGVVPPK SQRQTSWCQA IAPCHVAWRA INDYGGLSAK KEQNLP
|
|---|
| |