Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2196 |
Symbol | |
ID | 6065512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2410678 |
End bp | 2411469 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641601603 |
Product | transposase IS4 family protein |
Protein accession | YP_001725162 |
Protein GI | 170020208 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5433] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.398204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTA AAAAATTGAT GGAACATATT TCTATTATCC CCGATTACAG ACAAGCCTGG AAAATGGAAC ATAAGTTATC GGATATTCTA CTGTTGACTA TTTGTGCCGT TATTTCGGGT ACAGAAGGTT GGGAAGATAT AGAGGATTTT GGGGAAACAC ATCTCGATTT TTTGAAGCAA TATGGTGATT TTGAAAATGG TATTCCTGTT CACGATACCA TTGCCAGAGT TGTATCCTGT ATCAGCCCTA CAAAATTTCA TGAGTGCTTT ATTAACTGGA TGCGTGATTG TCATTCTTCA GATGATAAAG ACGTCATTGC AATTGATGGA AAAACGCTCC GGCATTCTTA TGATAAGAGT CGCCGCAGGG GAGCGATTCA TGTCATTAGT GCGTTCTCAA CAATGCACAG TCTGGTCATC GGACAGATCA AGACGGATGA TAAATCTAAT GAGATTACAG CTATCCCAGA ACTTCTTAAC ATGCTGGATA TTAAAGGAAA AATCATCACA ACTGATGCGA TGGGTTGCCA GAAAGATATA GCAGAGAAGA TACAAAAACA GGGAGGTGAT TATTTATTCG CGGTGAAAGG AAACCAGGGG TGGCTAAATA AAGCCTTTGA GGAAAAATTT CCGCTGAAAG AATTAAATAA TCCAGAGCAT GACAGTTACG CAATTTGTGA AAAGAGTCAC GGCAGAGAAG AAATCCGTAT TCATATTGTT TGCGATGTCC CTGATGAACT TATTGATTTC ACGTTTGAAT GGAAAGGACT GAAAATTCAC AATGTGTGTT AA
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Protein sequence | MELKKLMEHI SIIPDYRQAW KMEHKLSDIL LLTICAVISG TEGWEDIEDF GETHLDFLKQ YGDFENGIPV HDTIARVVSC ISPTKFHECF INWMRDCHSS DDKDVIAIDG KTLRHSYDKS RRRGAIHVIS AFSTMHSLVI GQIKTDDKSN EITAIPELLN MLDIKGKIIT TDAMGCQKDI AEKIQKQGGD YLFAVKGNQG WLNKAFEEKF PLKELNNPEH DSYAICEKSH GREEIRIHIV CDVPDELIDF TFEWKGLKIH NVC
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