Gene EcolC_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2196 
Symbol 
ID6065512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2410678 
End bp2411469 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content39% 
IMG OID641601603 
Producttransposase IS4 family protein 
Protein accessionYP_001725162 
Protein GI170020208 
COG category[L] Replication, recombination and repair 
COG ID[COG5433] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.398204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTA AAAAATTGAT GGAACATATT TCTATTATCC CCGATTACAG ACAAGCCTGG 
AAAATGGAAC ATAAGTTATC GGATATTCTA CTGTTGACTA TTTGTGCCGT TATTTCGGGT
ACAGAAGGTT GGGAAGATAT AGAGGATTTT GGGGAAACAC ATCTCGATTT TTTGAAGCAA
TATGGTGATT TTGAAAATGG TATTCCTGTT CACGATACCA TTGCCAGAGT TGTATCCTGT
ATCAGCCCTA CAAAATTTCA TGAGTGCTTT ATTAACTGGA TGCGTGATTG TCATTCTTCA
GATGATAAAG ACGTCATTGC AATTGATGGA AAAACGCTCC GGCATTCTTA TGATAAGAGT
CGCCGCAGGG GAGCGATTCA TGTCATTAGT GCGTTCTCAA CAATGCACAG TCTGGTCATC
GGACAGATCA AGACGGATGA TAAATCTAAT GAGATTACAG CTATCCCAGA ACTTCTTAAC
ATGCTGGATA TTAAAGGAAA AATCATCACA ACTGATGCGA TGGGTTGCCA GAAAGATATA
GCAGAGAAGA TACAAAAACA GGGAGGTGAT TATTTATTCG CGGTGAAAGG AAACCAGGGG
TGGCTAAATA AAGCCTTTGA GGAAAAATTT CCGCTGAAAG AATTAAATAA TCCAGAGCAT
GACAGTTACG CAATTTGTGA AAAGAGTCAC GGCAGAGAAG AAATCCGTAT TCATATTGTT
TGCGATGTCC CTGATGAACT TATTGATTTC ACGTTTGAAT GGAAAGGACT GAAAATTCAC
AATGTGTGTT AA
 
Protein sequence
MELKKLMEHI SIIPDYRQAW KMEHKLSDIL LLTICAVISG TEGWEDIEDF GETHLDFLKQ 
YGDFENGIPV HDTIARVVSC ISPTKFHECF INWMRDCHSS DDKDVIAIDG KTLRHSYDKS
RRRGAIHVIS AFSTMHSLVI GQIKTDDKSN EITAIPELLN MLDIKGKIIT TDAMGCQKDI
AEKIQKQGGD YLFAVKGNQG WLNKAFEEKF PLKELNNPEH DSYAICEKSH GREEIRIHIV
CDVPDELIDF TFEWKGLKIH NVC