Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2124 |
Symbol | |
ID | 6066848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2321350 |
End bp | 2322537 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641601532 |
Product | putative MFS-type transporter YdeE |
Protein accession | YP_001725091 |
Protein GI | 170020137 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0942294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.976791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTAT CCCTACGACG CTCTACCAGC GCCCTTCTTG CCTCGTCGTT GTTATTAACC ATCGGACGCG GCGCTACGCT GCCATTTATG ACCATTTACT TGAGTCGCCA GTACAGCCTG AGTGTCGATC TAATCGGTTA TGCGATGACA ATTGCGCTCA CTATTGGCGT CGTTTTTAGC CTCGGTTTTG GTATCCTGGC GGATAAGTTC GACAAGAAAC GCTATATGTT ACTGGCAATT ACCGTCTTCG CCAGCGGTTT TATTGCCATT CCTTTAGTGA ATAACGTGAC GCTGGTTGTG CTCTTTTTTG CCCTCATTAA CTGCGCCTAT TCTGTTTTTG CTACCGTGCT GAAAGCCTGG TTTGCCGACA ATCTTTCGTC CACCAGCAAA ACGAAAATCT TCTCAATCAA CTACACCATG CTAAACATTG GCTGGACCAT CGGTCCGCCG CTCGGCACGC TGTTGGTGAT GCAGAGCATC AATCTGCCCT TCTGGCTGGC AGCTATCTGT TCCGCGTTTC CCATGCTTTT CATTCAAATT TGGGTAAAGC GCAGCGAGAA AATCATCGCC ACGGAAACAG GCAGTGTCTG GTCGCCGAAA GTTTTATTAC AAGATAAAGC ACTGTTGTGG TTTACCTGCT CTGGTTTTCT GGCTTCTTTT GTAAGCGGCG CATTTGCTTC ATGCATTTCA CAATATGTGA TGGTGATTGC TGATGGGGAT TTTGCCGAAA AGGTGGTCGC GGTTGTTCTT CCGGTGAATG CTGCCATGGT GGTTACGTTG CAATATTCCG TGGGCCGCCG ACTTAACCCG GCTAACATCC GCGCGCTGAT GACAGCAGGC ACCCTCTGTT TCGTCATCGG TCTGGTCGGT TTTATTTTTT CCGGCAACAG CCTGCTATTG TGGGGTATGT CAGCTGCGGT ATTTACTGTC GGTGAAATCA TTTATGCGCC GGGCGAGTAT ATGTTGATTG ACCATATTGC GCCGCCAGGA ATGAAAGCCA GCTATTTTTC CGCCCAGTCT TTAGGCTGGC TTGGTGCCGC GATTAACCCA TTAGTGAGTG GCGTAGTGCT AACCAGCCTG CCGCCTTCCT CGCTGTTTGT CATCTTAGCG TTGGTGATCA TTGCTGCGTG GGTGCTGATG TTAAAAGGGA TTCGAGCAAG ACCGTGGGGG CAGCCCGCGC TTTGTTGA
|
Protein sequence | MNLSLRRSTS ALLASSLLLT IGRGATLPFM TIYLSRQYSL SVDLIGYAMT IALTIGVVFS LGFGILADKF DKKRYMLLAI TVFASGFIAI PLVNNVTLVV LFFALINCAY SVFATVLKAW FADNLSSTSK TKIFSINYTM LNIGWTIGPP LGTLLVMQSI NLPFWLAAIC SAFPMLFIQI WVKRSEKIIA TETGSVWSPK VLLQDKALLW FTCSGFLASF VSGAFASCIS QYVMVIADGD FAEKVVAVVL PVNAAMVVTL QYSVGRRLNP ANIRALMTAG TLCFVIGLVG FIFSGNSLLL WGMSAAVFTV GEIIYAPGEY MLIDHIAPPG MKASYFSAQS LGWLGAAINP LVSGVVLTSL PPSSLFVILA LVIIAAWVLM LKGIRARPWG QPALC
|
| |