Gene EcolC_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1541 
Symbol 
ID6065685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1708256 
End bp1709080 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content52% 
IMG OID641600958 
Productnickel/cobalt efflux protein RcnA 
Protein accessionYP_001724528 
Protein GI170019574 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT TTACAACTCT TCTTCAGCAA GGAAACGCCT GGTTCTTCAT CCCCAGCGCC 
ATCTTACTTG GTGCGCTTCA TGGCCTGGAA CCAGGGCACT CAAAAACGAT GATGGCGGCG
TTTATCATCG CCATCAAAGG CACCATTAAA CAAGCGGTGA TGCTCGGACT GGCAGCAACT
ATTTCGCATA CCGCAGTGGT CTGGTTAATT GCCTTTGGCG GGATGGTGAT CAGCAAGCGC
TTTACTGCTC AATCAGCAGA ACCGTGGCTC CAGCTGATTT CCGCAGTGAT CATTATTAGC
ACCGCGTTCT GGATGTTCTG GCGTACCTGG CGCGGCGAAC GCAACTGGCT GGAGAATATG
CACGGGCATG ATTATGAGCA TCATCATCAC GATCACGAAC ATCACCACGA CCATGGACAT
CATCACCATC ACGAACATGG CGAGTATCAG GATGCCCATG CACGAGCCCA TGCCAATGAC
ATTAAACGAC GCTTTGATGG TAGAGAGGTC ACCAACTGGC AAATTTTGTT ATTTGGCTTA
ACCGGTGGCC TTATCCCCTG CCCGGCAGCA ATTACCGTGC TGTTGATATG CATTCAGTTG
AAAGCCCTGA CACTGGGCGC AACACTGGTC GTCAGTTTCA GCATTGGCCT GGCGTTAACG
CTTGTCACCG TAGGCGTTGG CGCAGCAATC AGCGTTCAGC AGGTCGCAAA ACGCTGGAGC
GGATTTAACA CTCTCGCTAA ACGCGCCCCC TATTTTTCCA GTCTGTTGAT TGGCTTAGTC
GGTGTGTATA TGGGCGTACA TGGCTTCATG GGCATAATGC GATAA
 
Protein sequence
MTEFTTLLQQ GNAWFFIPSA ILLGALHGLE PGHSKTMMAA FIIAIKGTIK QAVMLGLAAT 
ISHTAVVWLI AFGGMVISKR FTAQSAEPWL QLISAVIIIS TAFWMFWRTW RGERNWLENM
HGHDYEHHHH DHEHHHDHGH HHHHEHGEYQ DAHARAHAND IKRRFDGREV TNWQILLFGL
TGGLIPCPAA ITVLLICIQL KALTLGATLV VSFSIGLALT LVTVGVGAAI SVQQVAKRWS
GFNTLAKRAP YFSSLLIGLV GVYMGVHGFM GIMR