Gene EcolC_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1094 
Symbol 
ID6065073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1193001 
End bp1193699 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content52% 
IMG OID641600510 
ProductDTW domain-containing protein 
Protein accessionYP_001724088 
Protein GI170019134 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.158379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0446057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA ACGCTGTTCT CCAGTTACGC GCCGAGCGTA TTGCGCGCGC AACACGTCCT 
TTTCTTGCCC GCGGTAATCG CGTTCGTCGC TGCCAACGCT GTCTTTTGCC AGAGAAATTA
TGTCTCTGTT CGACAATTAC CCCAGCACAA GCAAAAAGTC GCTTCTGTTT GCTGATGTTC
GACACCGAGC CAATGAAGCC CAGTAATACC GGGCGTCTCA TTGCTGATAT TTTGCCTGAT
ACCGTTGCGT TTCAATGGTC GCGTACCGAA CCCTCGCAGG ATTTGCTGGA GTTGGTGCAA
AACCCGGACT ATCAGCCAAT GGTGGTCTTT CCCGCTTCGT ATGCTGATGA GCAACGGGAA
GTGATCTTCA CACCACCTGC CGGTAAGCCA CCGCTGTTTA TCATGCTCGA TGGTACCTGG
CCGGAAGCTC GCAAGATGTT TCGTAAAAGT CCGTATCTGG ATAATCTTCC CGTCATTTCC
GTCGATCTTT CCCGGCTTTC TGCCTATCGC CTGCGTGAAG CCCAGGCTGA AGGCCAATAT
TGTACTGCCG AGGTAGCCAT CGCACTGTTA GATATGGCCG GCGATACCGG GGCGGCGGCA
GGGTTAGGCG AGCATTTTAC CCGCTTTAAA ACACGCTATC TGGCAGGAAA AACGCAACAT
CTGGGTAGCA TCACAGCAGA ACAGTTAGAA AGCGTTTAA
 
Protein sequence
MTENAVLQLR AERIARATRP FLARGNRVRR CQRCLLPEKL CLCSTITPAQ AKSRFCLLMF 
DTEPMKPSNT GRLIADILPD TVAFQWSRTE PSQDLLELVQ NPDYQPMVVF PASYADEQRE
VIFTPPAGKP PLFIMLDGTW PEARKMFRKS PYLDNLPVIS VDLSRLSAYR LREAQAEGQY
CTAEVAIALL DMAGDTGAAA GLGEHFTRFK TRYLAGKTQH LGSITAEQLE SV