Gene EcolC_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1080 
Symbol 
ID6065557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1170511 
End bp1171029 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content46% 
IMG OID641600492 
Producthypothetical protein 
Protein accessionYP_001724074 
Protein GI170019120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.072427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000310678 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTTTTT CTCACCGACT GTTCTTACTT CTGATTCTCC TGCTGACGGG AGCACCAATA 
CTCGCTCAGG AGCCTTCTGA CGTTGCGAAA AACGTGCGTA TGATGGTTTC CGGTATTGTC
AGTTACACCC GCTGGCCTGC GCTATCAGGG CCACCAAAGT TATGTATCTT TTCATCTTCA
CGTTTTAGTA CCGCCCTACA AGAGAATGCC GCGACATCTT TGCCTTATCT GCCTGTCATC
ATTCACACTC AACAAGAGGC GATGATTTCA GGCTGCAATG GTTTTTATTT TGGCAACGAG
TCACCGACAT TCCAGATGGA ATTAACCGAA CAATATCCGT CAAAGGCGTT ATTATTAATT
GCCGAACAAA ATACCGAGTG CATTATTGGT AGCGCCTTTT GTCTGATCAT CCACAATAAT
GACGTCAGAT TTGCCGTAAA CCTGGATGCC TTATCGCGTA GCGGTGTAAA GGTCAACCCG
GATGTCTTAA TGCTCGCACG GAAGAAAAAT GATGGATAA
 
Protein sequence
MRFSHRLFLL LILLLTGAPI LAQEPSDVAK NVRMMVSGIV SYTRWPALSG PPKLCIFSSS 
RFSTALQENA ATSLPYLPVI IHTQQEAMIS GCNGFYFGNE SPTFQMELTE QYPSKALLLI
AEQNTECIIG SAFCLIIHNN DVRFAVNLDA LSRSGVKVNP DVLMLARKKN DG