| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0862 |
|---|
| Symbol | |
|---|
| ID | 6065016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 926998 |
|---|
| End bp | 928374 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641600265 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001723858 |
|---|
| Protein GI | 170018904 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3710] DNA-binding winged-HTH domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.657213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTAG AAAATAAATT CTCATATCAT TTTCTTGAGG GATTAACGCT CACGGAAGAT
GGAATTCTTA CTCAAGGAAA TGAGCAAGTT TATATTCCAC AGAAAGAGTT AGGTGTATTA
ATAGTATTAC TTGAATCCGC TGGTCATGTT GTACTGAAAG ATATGATCAT CGAATCAGTA
TGGAAAAATA TTATTGTTAG TGACGAGTCC CTGACAAGAT GTATCTATTC TTTGCGCTGC
ATTTTTGAAA AAATTGGCTA TGATCGTTGC ATAGAAACAA TCTACCGGAA AGGTTATCGT
TTCAGCGGGC AGGTTTTCAA AACTAAAATT AATGAAGATA ATACTTCAGA CTATTCCATA
GCTATATTCC CTTTCACTAC TTCATTGAAT ACACTGGATC CATTAATACT TAATCAGGAA
TTAGTGCAAA TCATTTCAAA TAAAAAAATC GATGGTCTCT ATACCTATCC GATGGCTGCG
ACAAATTTTT GTAATGATCA CATATCTCAA AATTCATTCT TGAGCAGATT CAAGCCAGAT
TATTTCGTTA CAGGAAGAAT AAACCAGAAT AATGCAGTGA ACACTTTATA CATTGAGTTG
ATCGACGCTA AAAACCTTTT CCTCATCGCC AGTAATCATC TCCCTGTTGA TGAACTACAT
AATACATCAC AATTTATTAT AGATAATATC CTTCAAACGG TACATAAACC AGAACGATCT
GTAAGATTAG CTAAGCAGGA CCAAGGATAT AAGAATCATT ATTTATCAGA TGAAATGTTA
GCCGGAAAGA AAGAACTTTA CGACTTCACC CCTGAAAGCA TTTACAGGGC CATGACTATA
TTTGATAGAT TACAAAATAA AAGTGATATA CAGACGCTAA AAACAGAATG TTATTGCCTT
CTAGCGGAAT GCCATATGTC TTTGGCACTT CATGGAAAAA GTGAACTTGA ACTTGCTGCT
CAAAAAGCAT TAGAGCTTTT AGATTATGTA TCAGACATAA CCACTGTCGA TGGAAAAATT
TTAGCTATTA TGGGACTGAT AACTGGTCTG TCTGGACAAG CAAAAGTATC TCATATCTTA
TTTGAACAGG CTAAGATACA CTCAACTGAT ATAGCCTCTC TCTACTACTA TAGGGCACTA
GTCCACTTTC ATAATGAAAA AATTGAAGAG GCAAGGATTT GTATAGACAA ATCACTACAA
CTCGAACCCA GAAGACGAAA AGCAGTTGTG ATAAAAGAAT GTGTAGATAT GTATGTGCCT
AACCCGCTCA AAAACAACAT TAAACTCTAC TATAAAGAAA CTGAGAGTGA AAGCCATCGA
GTTATAATTG ACAACATTTT GAAATTAAAG CAGCTGACGA GAATTTGTAT GCGATAA
|
|---|
| Protein sequence | MDLENKFSYH FLEGLTLTED GILTQGNEQV YIPQKELGVL IVLLESAGHV VLKDMIIESV
WKNIIVSDES LTRCIYSLRC IFEKIGYDRC IETIYRKGYR FSGQVFKTKI NEDNTSDYSI
AIFPFTTSLN TLDPLILNQE LVQIISNKKI DGLYTYPMAA TNFCNDHISQ NSFLSRFKPD
YFVTGRINQN NAVNTLYIEL IDAKNLFLIA SNHLPVDELH NTSQFIIDNI LQTVHKPERS
VRLAKQDQGY KNHYLSDEML AGKKELYDFT PESIYRAMTI FDRLQNKSDI QTLKTECYCL
LAECHMSLAL HGKSELELAA QKALELLDYV SDITTVDGKI LAIMGLITGL SGQAKVSHIL
FEQAKIHSTD IASLYYYRAL VHFHNEKIEE ARICIDKSLQ LEPRRRKAVV IKECVDMYVP
NPLKNNIKLY YKETESESHR VIIDNILKLK QLTRICMR
|
|---|
| |