| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4056 |
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| Symbol | |
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| ID | 6090446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4474204 |
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| End bp | 4475748 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641599153 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001722771 |
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| Protein GI | 170026266 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTTT CGCAACCCTT ATCTGCTGCC CCTTGCGGGG CAGAATATCT GCGGGCGATA
TTACGTGCGC CGGTGTATGA GGTGGCGCAA GTCACCCCGT TACAAGTGAT GGAGAAAATC
TCCTCGCGCG TGGGTAATAC CGTTTTAGTG AAGCGTGAAG ATCGGCAGCC GGTACACAGC
TTTAAGTTGC GCGGTGCTTA CGCGATGATC TCCAGCCTGA CGGAAGAGCA GAAAGCCTGT
GGCGTCGTCA CGGCTTCTGC GGGTAACCAT GCTCAAGGCG TGGCGCTTTC TGCCCATAAA
ATGGGGATTA AAGCGCTGAT CGTCATGCCC GTTGCTACTG CAGATATTAA AGTTGATGCG
GTACGTGCTT TTGGCGGCGA GGTGCTGCTG TTTGGCGCTA ATTTTGATGA AGCCAAAACC
AAAGCTATCG CGCTTGCTCA AGAGCAGGGC TACACCTTTG TGCCACCGTT TGACCATCCG
GCGGTGATTG CCGGGCAGGG GACGCTGGCG ATGGAGTTAC TGCAACAAGA TGCCCATCTT
GATCGGGTTT TTGTCCCAGT GGGCGGCGGT GGGCTGGTGG CCGGTGTGGC GGTGCTTATC
AAGCAATTGA TGCCACAGAT TAAAGTGATT GGTGTTGAAG CCGAGGATTC TGCCTGTTTG
CGGGCCGCGC TGGATGCGGG GCAGCCGGTC GATTTGGCGC GTGTCGGGCT GTTTGCCGAG
GGCGTGGCAG TTAAGCGTAT CGGTGACGAG CCTTTCCGCC TGTGTCAGGA ATATCTGGAC
GATGTGATCA CCGTTGACAG TGATGCTATC TGTGCCGCAG TCAAAGATCT GTTTGAGGAT
GTTCGCGCCA TTGCTGAGCC TTCTGGTGCG TTGGCATTGG CGGGCCTGAA AAAATATGTG
CAGCAGCATA ATATTCAGGG CGAGCGTCTG GCACATGTGC TTTCTGGTGC AAACGTGAAC
TTCCATGGTT TGCGTTATGT GTCAGAGCGT TGCGAGTTAG GTGAGCAGCG TGAAGCCCTG
CTGGCGGTGA CTATTCCAGA GCAAAAGGGC AGTTTCCTGC GTTTCTGTGA ATTACTGGGT
GGCCGTTCGG TAACGGAATT TAACTACCGT TACGCCGATG CTGAAAACGC CTGCATTTTT
GTTGGGGTAC GTTTGACTCG TGGTTATGCT GAGCGGGTTG AAATTCTTGC TGAATTGCAG
GACAAAGGTT ATCAGGTGGT CGATTTATCT GATGACGAAA TGGCGAAACT GCATGTGCGT
TATATGGTTG GTGGGCGGCC CTCGAAACCA CTGCGTGAGC GCCTGTTCAG CTTTGAATTC
CCCGAGTCAC CAGGCGCTTT GCTGAAATTC CTGCATACGT TGGGCACTCA CTGGAATATT
TCTCTGTTCC ACTACCGCAG CCATGGCACA GATTTTGGCC GGGTATTGGC GGCATTTGAG
TTGTCGGCTA CCGAACCGCA ATTTGAAGAG CGCTTAGCGG CTCTGGGCTA CTATTGCCAC
GATGAAACGG ATAACCCGGC GTTTAAGTTC TTTTTAGCGG GTTAA
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| Protein sequence | MAVSQPLSAA PCGAEYLRAI LRAPVYEVAQ VTPLQVMEKI SSRVGNTVLV KREDRQPVHS
FKLRGAYAMI SSLTEEQKAC GVVTASAGNH AQGVALSAHK MGIKALIVMP VATADIKVDA
VRAFGGEVLL FGANFDEAKT KAIALAQEQG YTFVPPFDHP AVIAGQGTLA MELLQQDAHL
DRVFVPVGGG GLVAGVAVLI KQLMPQIKVI GVEAEDSACL RAALDAGQPV DLARVGLFAE
GVAVKRIGDE PFRLCQEYLD DVITVDSDAI CAAVKDLFED VRAIAEPSGA LALAGLKKYV
QQHNIQGERL AHVLSGANVN FHGLRYVSER CELGEQREAL LAVTIPEQKG SFLRFCELLG
GRSVTEFNYR YADAENACIF VGVRLTRGYA ERVEILAELQ DKGYQVVDLS DDEMAKLHVR
YMVGGRPSKP LRERLFSFEF PESPGALLKF LHTLGTHWNI SLFHYRSHGT DFGRVLAAFE
LSATEPQFEE RLAALGYYCH DETDNPAFKF FLAG
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