Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3966 |
Symbol | |
ID | 6091250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4376621 |
End bp | 4377268 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641599060 |
Product | hypothetical protein |
Protein accession | YP_001722682 |
Protein GI | 170026177 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.52495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAATT TAGTCTTCGC TGCCATTAGC CTCTTGCCGC TCAGTGCCGC TGGCGTGATC GATATTCAAC CACAGGTCGT GGAACTACAG CAGGTAAATA CGGTGGTTAC CGTGATCAAC CATGGCATGA CTGCTGAATA TATTACGGTG CAGTTATATC GGTTAAATAA CCCTGGTGTC GCCCCTGAAT TGGAATCGCT GACCCCTGTT GGCTACCAGC AGCAGCCCTT ACTTTTTGCC ACACCGCTGA AACTGACGCT AGGCCCTCGA CAGAGTGGGA AAATTTTTCT ACATGCCTTA GGGGCACCGG AACAAGAGCA GGTTTATCGG TTAGCCGTGG TACCAAGCAA CCACCTGAAA ATCAGTGGCA ATAATACGGC TGTCGTGGGT GTGCAGATCA GTTATATGGG GCTTATCAGG CACCTGCCAG CATCAATACA ACATCAATGG ACACACCGTT GTATCGCGGG GAAGCCTGAA TTACACAATA CCGGCAATAC CCGCCTGTAC TGGCATCAAC TGCAAGCACA GGGGCAAATG ATAGACGATT TTACGCTCTA CCCCGGTCGG TATCGGCAGT TAGCTTTCAA TGAGTTGCAA GGAAAAGTAG AGGATCAGGC GGTTAGCCTA CAGTGCCCTT CGGGCTAG
|
Protein sequence | MKNLVFAAIS LLPLSAAGVI DIQPQVVELQ QVNTVVTVIN HGMTAEYITV QLYRLNNPGV APELESLTPV GYQQQPLLFA TPLKLTLGPR QSGKIFLHAL GAPEQEQVYR LAVVPSNHLK ISGNNTAVVG VQISYMGLIR HLPASIQHQW THRCIAGKPE LHNTGNTRLY WHQLQAQGQM IDDFTLYPGR YRQLAFNELQ GKVEDQAVSL QCPSG
|
| |