| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3965 |
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| Symbol | |
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| ID | 6091266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4375963 |
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| End bp | 4376649 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641599059 |
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| Product | hypothetical protein |
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| Protein accession | YP_001722681 |
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| Protein GI | 170026176 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACC TTTATTCGAT ACTCAGCATC GCGCTGTTAC TGGCCCCCGG TTCTGCCACT
CACGGCCAAC TGCTTGCTAC CCCCACCCGT ATTGCGGTAG AGGCACAAGA GCTGAAGCGC
ACCGTGCAGG TGTATAACAG CGGCGATACA CCGCTTTATC TGGATATCAC ATTACAACGT
GTGGATAACC CTGGCGTGAA CCCTGAACGT AAAACACCCA TCAGTGAAAT CTCTCAACCT
GAAATGATTT TTAATCCTAA CCGCATTACG TTAGGGCCGA GACAAAAGCG GGATATTACG
CTGATCCCAC TCAAATCGCC GGTACAGGAA ACCCTTTACC GCCTGTATAT CAACCCCGTG
CTCAATATCA AAGCGGTTGG CGATGGGGAG GATAAAAGTA AAGTTCATGC CCCGATGACC
ATCAGCATTG GTTATGGCGT GCTGATTCAG CATTTGCCAC CGGCGGCGGC ACAAACTCGT
CATTGGCAAC ATCAATGCTC AACCACTGGC GAGCTAACAC TCACAGCTAC CGGAACGGTA
CACAGTAAGT TTAAGCAGCT CGAATCGGGC GGTAACGCCG CACTGGCCGA CAGTCTAAAC
CTGTATCCGG GCACCGCGCT CACACTGCCC GTCAAACAAC TCAATGGTGA GGTGGACGGT
GAAAAATTTA GTCTTCGCTG CCATTAG
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| Protein sequence | MKYLYSILSI ALLLAPGSAT HGQLLATPTR IAVEAQELKR TVQVYNSGDT PLYLDITLQR
VDNPGVNPER KTPISEISQP EMIFNPNRIT LGPRQKRDIT LIPLKSPVQE TLYRLYINPV
LNIKAVGDGE DKSKVHAPMT ISIGYGVLIQ HLPPAAAQTR HWQHQCSTTG ELTLTATGTV
HSKFKQLESG GNAALADSLN LYPGTALTLP VKQLNGEVDG EKFSLRCH
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