| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3964 |
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| Symbol | |
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| ID | 6088319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4373630 |
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| End bp | 4375945 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641599058 |
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| Product | hypothetical protein |
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| Protein accession | YP_001722680 |
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| Protein GI | 170026175 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTATT ATTCAAAAAT TAATCATAGC TTACTTTTTA CTTTAGCCTT ATTCACACTA
AAGCTCGCTC ATGCAGAAGC AGTTAAAATA GAGTATTTAG TGCCAATGGG GTTTTCCGCG
GCTGAAGAGA ACAACTCACT TCAGTTATTA GGGGTATTAG ACAGTAAGAC ATTGCCCAGT
CCTATTACCT TCTCAGAAGA AGAACAACAA CTGCAATTTA ATCAACAAAA CTATCGACAT
AATAATATTA GTGAAGAATC TATTATTTTA TTGGGAGAGA TATTATCTCA AATACCGTAT
TTACAGTGTA AAACCGGCTG TGATTATACT TTATCGGGTC ACCGCGTGGC GTTAGATAAA
GTGAATAACA CATTGACGAT CACCAATAAT AATAATCGTT ATCTGATGCC AACCACGACA
TGGGGGTTGG TCAGCAATCA ATCTCTCGAT TTGCGAATGA CAGCAGCCCA CTATCGGGCG
ATGTCAGTCC GTGGTCAAAG TTACATCGGC TTGCCATGGC AATCTTATGG CTTTGCATCT
TGGTTTTATA ACGCGATTCA GTCACAGAAT ACGCTGCAAT CACAGAGCAC CTATCAGCCC
GTTAATCGCC CTCAGTATCA GCGCCTAACC CAAAAAGGGA TCGGCAGTTG GTATTTGCAA
AAGAACTTCT CGGCACTCTA TTTACGCACC GGTCGGCAAA ACAACCTGGA TAACAACGCA
GGTAGCGTTC ACACCCTGAT CAACCCTGCG TTGGACCAAT TTGTAACACT CGGTAGTCAA
AGCTATCTGG CCATCGATAA GCCTTCCACC GGCAGTATCG TGCTCTATGC CGCTCAGGAC
GGTGACTACG AAATATACCG CGATAATCAG CTCATTCGCC GCATCCCCGC TCAATTGGGT
CGCAACGAGA TAGATTACAG CCAACTACCA GGGGGCTATT ACAACGTTGA GATTCGTTTA
GTTGATCGTC TTGGGCGGAT CGTCAGCCAG GAAAACCAAA CCATCAGCAA TATTGGCAAT
CAGACCAATA ATGGTTGGTT TCTGACAATG GGCAAAGGGC CAGCCAAGGG TAAAAAAACG
CCCCGCTTAG TCCAGTTTGG ACGCAGCAGG GTGATAGAAA GCGTACAAAC CAATATCACG
CTACTTAAAG ATGATGCCCA TCACTGGGCC GTGGAAGCGA ACGTCTCACG CCCTTTAAGC
CTCAATAAGG TGAATATCAC CCCAACAGGG GGCTTGATGT CAGGAGAGAA ACGCAGTGGA
GGTTACGTTC GCTTAAATGG CGGCAACAAT ACACTGGGTT ACTTTTCATT AGCTCGCTAT
CAGTCACCTT ATGTCTCGCG ATACGCACCT GACTCTGGCA GTACCTCAGG CTCCTATACC
CGGCGTATTG GGCCAACCCA GCTAAGTTAT CAATTCAATC AGTACCGCAA TAACCGGCAA
CACCGTATCC AAAGTGGTTG GGACTGGCAA TTACCACAAT TTAACCTCGC GTTATCCCTT
GGGCTGCAAA ATGGTGGGCA ATGGAACAGC CACAATAATT ACGGCGTCTT CCTGAACACC
ACCCTGTCCT TCGGCCAAAG TAACGCCAGC ATCAATACGG CTTATACCCA ACAACAGTTG
AATACCAGCG CCAGTTACCA GAAAGAGTTT ATTGATAACT ATGGGGCCAG CACTTTGGGT
GTCAGTGGTA GTGCCAGCGG GAAACTAAAT AGCGTCGGCG GTTTTGCTAA ACGCAGCGGG
AGCCGGGGGG ATATCTCTGG CCGGGTAGGC ATTGATAACC AGATAACCAA CGGGGGGATT
AGCTATAACG GCATGTTGGC ACTCAGCTCA CAGGGGGTTG CCTTGGGGCG CAGCAGTTAT
AGCGGAGCGG CACTCTTGAT CAAAGCCCCC GCTCTGGGCG GCACCCCCTA TAGTTTTCAT
GTGGAGGATA GCCCAATAAC CGGTGGTGGC ACCTATGCGA TACCGGTCCC CCGCTACCAA
GACCGTTTCT TTGTCCGTAC TCACACCGAC CGCAGTGATA TGGATATGAA TATTCAACTG
CCGGTCAATA TTGTACGCGC TCACCCTGGG CAAGTTTTTT CAGGCGAAGC TGACATCACA
TTAAATCTGC TATACAGCGG TTTTCTCAAG AATGCACAAG GGCTACCGGT GAGCGGGGTG
ATTGAGGAGA CGGGTGATAC CGCTTATCCC AATGGGCTGT TTTCCATTAA CGCCCAAAAT
AGGCTGCAAG CGATAACCGT CCATGGCCCC TCTGGCCGTT ACCGCTGTGA TATGCACTCG
CAACCTACTC ATATTTACCT TTGCCACGCC GATTAA
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| Protein sequence | MAYYSKINHS LLFTLALFTL KLAHAEAVKI EYLVPMGFSA AEENNSLQLL GVLDSKTLPS
PITFSEEEQQ LQFNQQNYRH NNISEESIIL LGEILSQIPY LQCKTGCDYT LSGHRVALDK
VNNTLTITNN NNRYLMPTTT WGLVSNQSLD LRMTAAHYRA MSVRGQSYIG LPWQSYGFAS
WFYNAIQSQN TLQSQSTYQP VNRPQYQRLT QKGIGSWYLQ KNFSALYLRT GRQNNLDNNA
GSVHTLINPA LDQFVTLGSQ SYLAIDKPST GSIVLYAAQD GDYEIYRDNQ LIRRIPAQLG
RNEIDYSQLP GGYYNVEIRL VDRLGRIVSQ ENQTISNIGN QTNNGWFLTM GKGPAKGKKT
PRLVQFGRSR VIESVQTNIT LLKDDAHHWA VEANVSRPLS LNKVNITPTG GLMSGEKRSG
GYVRLNGGNN TLGYFSLARY QSPYVSRYAP DSGSTSGSYT RRIGPTQLSY QFNQYRNNRQ
HRIQSGWDWQ LPQFNLALSL GLQNGGQWNS HNNYGVFLNT TLSFGQSNAS INTAYTQQQL
NTSASYQKEF IDNYGASTLG VSGSASGKLN SVGGFAKRSG SRGDISGRVG IDNQITNGGI
SYNGMLALSS QGVALGRSSY SGAALLIKAP ALGGTPYSFH VEDSPITGGG TYAIPVPRYQ
DRFFVRTHTD RSDMDMNIQL PVNIVRAHPG QVFSGEADIT LNLLYSGFLK NAQGLPVSGV
IEETGDTAYP NGLFSINAQN RLQAITVHGP SGRYRCDMHS QPTHIYLCHA D
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