Gene YPK_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3880 
Symbol 
ID6088031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4280735 
End bp4281547 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content50% 
IMG OID641598972 
Producthypothetical protein 
Protein accessionYP_001722598 
Protein GI170026093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGC CTGTTTTTTT GTGTGATCTG GACGATACGC TATTCCAGAC ACGGCGCAAA 
ATGGTCGATG AGCTAGACCT TCCTCCTTTT CGGGTAGGGG CGTTGGATCG CAGCCTGACA
CCCCGCAGTT TCATGACCGA AGAGCAGTCC ATGTTGGTGG ATTGGCTCTT GGAGCACGCA
GAATTTATCC CCGTGACCGC CCGTGGAACA GAAGAGATCA GCCGCGTCAA CATTCCTTTC
AGCTCATGGG CGATCACCAC CCATGGTGCC GTTATTCTGA CGCCCGACAG ACAACCCGAT
GCCGGCTGGC AGGATACGGT GCTGACGAAC TTGCAGCCCT ATCGTGACCG TTTGATAGCA
ATGGAAAGCC GTATCAATGA CATGATGGCC GAACGGGGCC TGAATGCCTG GTGTCGAATC
AATTATGAAT ACGGCGACAC CCCGGTTTAT TTCGTGATGA AACACCGTGA TAGCACACAG
ATAGCCGAGT TGTATGCCTT CAACGACCAA CTGGAATCCC TCTTTTCCAC TGATGGATTT
TATATTCACC GTAACAGCAA CAATATTGCG TGGTTACCGG TTTGTATCGA AAAAGGCCTG
GCGACCACTT ATCTGCTTGA TAAATTACGC CACGAACATG GCGCGTTTCC GGTTCTGGGT
TTCGGCGATA GCCTGAGCGA CTTCAGCTTT ATGCGCCACT GTCATTGGTT CGGTATGCCC
GCGAAAAGTC AGTTCTCGCA GGCCCTGACA TCGCATTTAT TTGATAACAC GACATTTAAT
AAAAATAATG TTAATGGAGA TAACGATGCA TGA
 
Protein sequence
MNKPVFLCDL DDTLFQTRRK MVDELDLPPF RVGALDRSLT PRSFMTEEQS MLVDWLLEHA 
EFIPVTARGT EEISRVNIPF SSWAITTHGA VILTPDRQPD AGWQDTVLTN LQPYRDRLIA
MESRINDMMA ERGLNAWCRI NYEYGDTPVY FVMKHRDSTQ IAELYAFNDQ LESLFSTDGF
YIHRNSNNIA WLPVCIEKGL ATTYLLDKLR HEHGAFPVLG FGDSLSDFSF MRHCHWFGMP
AKSQFSQALT SHLFDNTTFN KNNVNGDNDA