| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3845 |
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| Symbol | rhaB |
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| ID | 6089628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4233958 |
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| End bp | 4235376 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641598937 |
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| Product | rhamnulokinase |
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| Protein accession | YP_001722563 |
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| Protein GI | 170026058 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR02627] rhamnulokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCAA GTTATTATCC CGGTCAGCAA CAGCTTACGT TGCGGGAAGT CTGCCGCTTT
ACCAACCAGA TTAAATCTAT TGATGGCTCC GATGTCTGGG ATATCGATGC CATTGAACAA
TCTATCCGTG AGGGACTGAG CCAACTCGAC AGTGAAGGGA TAGCGCTGGA CAGCATCGGT
ATTGATAGCT GGGGAGTTGA TTTTGTTTTG CTTGATAAGC AAGGGAAACG GATCGGACAG
CCCGTATCTT ACCGTGATAG TCGTACGCAG GGAGTGATGG CGCGGGCGCA GCAGACGCTG
GGTAGCAATG CGATTTATCG CCGCACCGGT ATTCAGTTCT TGCCGTTCAA TACGCTGTAT
CAACTGCGGG CATTAAGTGA ACAACAACCT CACTTACTCG CCGATGTTGC CCACCTATTA
TTGATCCCAG ACTATTTGCA TTACCGCCTT ACCGGCCAGC TAAACTGGGA ATATACCAAT
GCCAGTACTA CCCAGTTGCT CAACATCGAA ACCGGCGATT GGGATAGCGA TTTACTGGCC
TATGCCGGCG TACCGGCCCA TTGGTTTGCC AAACCCGGCA AACCTGGCAA TACCATCGGC
TATTGGCACA GCGCCAACGG TCAGCAGGTT CCGGTGGTGG CCGTTGCCAC CCATGACACG
GCTAGCGCGG TTCTTGCCGC CCCGCTTATT GATGCTGATG CTGCCTATCT TAGCTCCGGT
ACCTGGTCAC TTATGGGCTT CGAAAGCGGT ACACCACTCA CCCACCAGCA GGCGCAGTGC
AGCAATATCA CCAACGAAGG GGGCGCAGAA GGCCGCTACC GCGTACTCAA AAATATTATG
GGTCTGTGGC TACTGCAACG GGCGACGGAT GAATTGCAGA TTGACGATTT ACCGCAGCTT
ATTGAGCAAG CGGCACGACA ACCCGCTTGC CGCTCGCTGA TCAATCCCAA TGACAGCCGT
TTTATTAATC CACCCAATAT GTGCCGTGAG ATCCAAAACG CCTGCCGTGA ACATCAGTTC
CCCGTGCCGA ACACGGCCGC CCAACTGGCC CGCTGTATCT TTGATAGCCT CGCCATGTTG
TACCGGCAAG TGGCTCAAGA ATTGGCAACA CTCCGCGGAC GCCCAATCAG CCACTTGCAT
ATCGTCGGTG GCGGCTGTCA GAACCAATTT CTGAATCAAC TGTGTGCCGA TGCCTGTGCC
TTGAATGTAA GCATGGGGCC GGTTGAGGCC TCCACGCTCG GCAATATTGG TAGCCAATTA
ATCTCGCTGG GTGAGGTCGC TGATGTCACC CATTACCGCC GTATCGTGGC GAATAACTTC
CCATTGCACC ATTTATCCCC TCACGACAAT TCGGACTTTG CTGCCCATTG GCTGCAATTC
CAGTCACTGA GTCAATTACC TAAGGAACTT TGCATATGA
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| Protein sequence | MLASYYPGQQ QLTLREVCRF TNQIKSIDGS DVWDIDAIEQ SIREGLSQLD SEGIALDSIG
IDSWGVDFVL LDKQGKRIGQ PVSYRDSRTQ GVMARAQQTL GSNAIYRRTG IQFLPFNTLY
QLRALSEQQP HLLADVAHLL LIPDYLHYRL TGQLNWEYTN ASTTQLLNIE TGDWDSDLLA
YAGVPAHWFA KPGKPGNTIG YWHSANGQQV PVVAVATHDT ASAVLAAPLI DADAAYLSSG
TWSLMGFESG TPLTHQQAQC SNITNEGGAE GRYRVLKNIM GLWLLQRATD ELQIDDLPQL
IEQAARQPAC RSLINPNDSR FINPPNMCRE IQNACREHQF PVPNTAAQLA RCIFDSLAML
YRQVAQELAT LRGRPISHLH IVGGGCQNQF LNQLCADACA LNVSMGPVEA STLGNIGSQL
ISLGEVADVT HYRRIVANNF PLHHLSPHDN SDFAAHWLQF QSLSQLPKEL CI
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