| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3841 |
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| Symbol | |
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| ID | 6090578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4231696 |
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| End bp | 4232568 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641598933 |
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| Product | transcriptional activator RhaR |
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| Protein accession | YP_001722559 |
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| Protein GI | 170026054 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGCAC CACTGCTGTT AGAAAGCCGG GATTATTTAC TCTCGGAACA GATGCCGGTG
GCGGTAACCA ATCGATACCC GCAGGAAACC TTCGTAGAGC ATACCCATCA ATTTTGTGAA
ATTGTGATTG TCTGGCGGGG AAATGGTTTA CATGTCCTGA ATGACCACCC TTATCGCATT
ACCTGTGGGG ACGTTTTTTA TATTCAAGCC GCAGACCATC ATAGCTACGA ATCCGTACAT
GATTTGGTAT TAGATAATAT TATCTATTGC CCAGAGCGAC TCCACCTGAA TGCGCAATGG
CATAAGTTAC TGCCGCCTTT GGGACCTGAA CAGAATCAGG GCTATTGGCG GTTAACGACA
CAAGGCATGG CGCAGGCACG GCCCATCATT CAACAGTTGG CGCAGGAATC GCGCAAGACG
GATTCCTGGT CGATACAACT GACCGAAGTC CTGTTATTGC AACTTGCCAT TGTGCTGAAA
CGTCATCGCT ATAGAGCTGA GCAAGCTCAC TTACTGCCCG ATGGCGAACA GCTTGATTTA
ATCATGTCTG CGTTGCAGCA AAGTCTGGGA GCCTATTTTG ATATGGCTAA TTTCTGCCAT
AAAAATCAGT TGGTTGAACG TTCTCTCAAG CAACTGTTCC GCCAGCAGAC CGGCATGAGT
ATCAGCCACT ACCTACGCCA GATTCGCTTG TGTCATGCCA AGTGTTTATT ACGCGGCAGT
GAGCATCGTA TCAGTGATAT CGCCGCTCGC TGTGGGTTTG AGGACAGTAA CTATTTCTCG
GCTGTTTTTA CCCGTGAAGC CGGTATGACC CCACGAGATT ATCGCCAGCG CTTTATCCGC
TCCCCGGTAT TACCCACTAA AAATGAACCG TGA
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| Protein sequence | MRAPLLLESR DYLLSEQMPV AVTNRYPQET FVEHTHQFCE IVIVWRGNGL HVLNDHPYRI
TCGDVFYIQA ADHHSYESVH DLVLDNIIYC PERLHLNAQW HKLLPPLGPE QNQGYWRLTT
QGMAQARPII QQLAQESRKT DSWSIQLTEV LLLQLAIVLK RHRYRAEQAH LLPDGEQLDL
IMSALQQSLG AYFDMANFCH KNQLVERSLK QLFRQQTGMS ISHYLRQIRL CHAKCLLRGS
EHRISDIAAR CGFEDSNYFS AVFTREAGMT PRDYRQRFIR SPVLPTKNEP
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