| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3829 |
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| Symbol | |
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| ID | 6089199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4219836 |
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| End bp | 4221983 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641598921 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001722548 |
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| Protein GI | 170026043 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.151921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TCCTCACGGT CTGCCCCTAT TGCGGCTCGG GATGTAAGTT AAATTTATTG
GTCGAAGACG GCGAGATTGT CGGTGCCGAA CCCGCTGATG GTGTCACTAA TCAGGGAGCG
TTGTGTCTGA AAGGGTACTA CGGCTGGGAT TTTCTTAACG ATACCCGCTT GTTGACGCCA
CGGTTGACCA CGCCCTTATT GCGGCGTCAG CGAGGCGAGG CGTTTCAGCC CGTGAGTTGG
GAGGCGGCGA TTGCGTTTAT CACGGCTAAA CTTAGCGCCA TAAAAGAACG TCATGGGCCT
GATGCCATCA TGATGACGGG CTCTTCCCGT GGGCCAGGTA ACGAAGCCAA TTATGTGATG
CAAAAATTTG CTCGTGCGGC GATCGGTACC AACAATATTG ATTGCTGCGC CCGCCTGTGC
CATGGCCCGT CAGTGGCTGG ATTGCAGCAA ACGCTGGGTA ACGGCGCGAT GAGCAACTCT
ATCGGTGAAA TTGAGAATAC TGACTGCATT TTGGTCTTTG GTTATAACGC GGCGGATTCT
CACCCCATTG TTGCCAGACG TATTCTGAAA GCCAAAAATA AGGGGGCGAA ACTTATTGTC
TGTGATCCAC GGCATATCGA AACCGCCCGT ATCGCCGATC AATGGTTGCC GCTGAAAAAT
GGTGCCAACA TGGCGCTGGT CAATGCATTT ATTCATGTTC TGATTGAAGA AAAACTCTAC
GACGCAAATT ATGTCCGCGA CCATACCCGT GGCTTTGATG AACTGAAAGC AGGCGTTGCC
GCATATCGCC CAGAGGATGT TGAACCGATT ACGGGGCTGT CTGCCAAAGC GGTGCGTCAG
GCCATGCGCA CTTATGCTGC GGCCCCTGCG GCCACCCTTC TATGGGGGAT GGGCGTGACC
CAATGGGGCC AGGCGGTTGA TGTGGTGAAA GGGCTCTCTT CGTTAGCGTT ATTAACCGGT
AATCTGGGGC GGCCAAATGT GGGCGTCGGG CCAGTACGAG GTCAGAATAA TGTGCAGGGC
GCGTGTGATA TGGGCGTGTT GCCGAATACC TTCCCCGGCT ATGAAAAAGT GACCGACAGT
GAGGCCAGAG CGCGTTTTGC TCACGCCTGG GGGGTCGCTG AACTGCCCGC GCATGTTGGG
TATTCGATTA CTGATGTGCC GCATAAAGTG GCAGAAGGGA AGCTTAAGGC CTACTACGTA
TTTGGTGAAG ATCCAATCCA GACCGAGCCA GATTTAGCGG CGATGCGTGC GGCTTTTGCC
GCACTGGATC TGGTCGTGGT GCAGGATATC TTTATGACCA AAACGGCAGA ACTGGCGGAT
GTCGTACTGC CTGCAACATC CTGGGGGGAG CATGAAGGGG TCTATACCAG TGCTGACCGG
GGGTTCCAGC ACTTTAATAA AGCCATTGAA CCGAAAGGGG ATGTGAAACC GGACTGGGAG
ATTATCAGCC TGATATCAAC CGCCATGGGT TACCCGATGG CATACCAAAA TACGCAACAA
ATCTGGGATG AGATGCGTGG CCTGTGCCCG CCATTCGCTG GGGCCACCTA TGATAAACTG
GCAGGATTGG GCTACGTGCA ATGGCCTTGC CCAACCGAAG ATCACCCTGG AACACCTTAT
CTCTATACCG ATAACCAATT CGCGACGGCT GACGGCAAAG GTTTGCTCAG TTGCGCGCCG
TGGCAGCCGC CTCATGAGCA GACCGACAGT GATTATCCTC TGGCCCTCTG TACCGTGCGT
GAAGTGGGGC ATTACAGTTG CCGCTCAATG ACCGGTAACT GCGCCACGCT AAAAATCTTG
GCGGATGAGC CGGGCTATGT GCAAATCCAT CCTGAGGATG CCAGCTATTT GGGGGTTATC
GATCAGGCGC TGATCTGGAT TTCATCACGA CGCGGGAGAG TGATCGCTCG TGCCAGCGTG
ACCGAACGGG CTAATCGTGG CGCGGTGTAT ATGACCTATC AGTGGTGGAT TGGGGCCTGT
AATGAACTGA CTGTGGACCA TGTTGATCCC GTGTCAAAAA CACCGGAATT TAAACATTGT
GCGGTTAAGG TCGAGGCGAT TAGCGATCAA ACTGCGGCAG AGCAATATGT TGAGCAACAA
TACAGCCAGT TGAAAAAACG GTTATCAGAC GCCGCAGTTG TACCATGA
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| Protein sequence | MKKILTVCPY CGSGCKLNLL VEDGEIVGAE PADGVTNQGA LCLKGYYGWD FLNDTRLLTP
RLTTPLLRRQ RGEAFQPVSW EAAIAFITAK LSAIKERHGP DAIMMTGSSR GPGNEANYVM
QKFARAAIGT NNIDCCARLC HGPSVAGLQQ TLGNGAMSNS IGEIENTDCI LVFGYNAADS
HPIVARRILK AKNKGAKLIV CDPRHIETAR IADQWLPLKN GANMALVNAF IHVLIEEKLY
DANYVRDHTR GFDELKAGVA AYRPEDVEPI TGLSAKAVRQ AMRTYAAAPA ATLLWGMGVT
QWGQAVDVVK GLSSLALLTG NLGRPNVGVG PVRGQNNVQG ACDMGVLPNT FPGYEKVTDS
EARARFAHAW GVAELPAHVG YSITDVPHKV AEGKLKAYYV FGEDPIQTEP DLAAMRAAFA
ALDLVVVQDI FMTKTAELAD VVLPATSWGE HEGVYTSADR GFQHFNKAIE PKGDVKPDWE
IISLISTAMG YPMAYQNTQQ IWDEMRGLCP PFAGATYDKL AGLGYVQWPC PTEDHPGTPY
LYTDNQFATA DGKGLLSCAP WQPPHEQTDS DYPLALCTVR EVGHYSCRSM TGNCATLKIL
ADEPGYVQIH PEDASYLGVI DQALIWISSR RGRVIARASV TERANRGAVY MTYQWWIGAC
NELTVDHVDP VSKTPEFKHC AVKVEAISDQ TAAEQYVEQQ YSQLKKRLSD AAVVP
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