| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3623 |
|---|
| Symbol | |
|---|
| ID | 6090132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3998285 |
|---|
| End bp | 3998986 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641598707 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001722343 |
|---|
| Protein GI | 170025838 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGG CTAAATTAAA ATTTCGACTA CACCGAACAG CAATTGTACT GATCTGTTTG
GCATTATTGG TCTTACTGAT GCAAGGCGCA TCCTATTTCA GCCTGAGCCA CCAGTTAGCA
CGTTCAGAGC AGGTCGAAGA GCTGGCACAA ACACTCGCCA AACAAGTTGC TTTTAACTTG
TCGCCCATTA TGGATAGCGG TGACGACAAT ATTGATAGCC AGAAAGTCGA TGCCATTCTT
CAACAACTGA CGCAATCCAG CCGTATTTTA GATGCCAGCG TCTATCAGAT TGACGGGACG
TTGGTTGCCA GCGCCGGAGA AAATGTGAAG GTACGCGACC GGCTGGCACT GGATGGTAAA
CGCCCTGGCA GTTATTTCAA CCACCAAATA GTTGAAATGA TCGCGGGTAA CAGTGGGCCA
AGTGGTTTTC TGCGCATGAC ACTGGATACC CACGTGTTGG CGACGGAATC CAAGCAAGTG
GATAACACCA CTAACTTACT GCGTCTGATG ATTCTGGTGG CTCTGGCCGT GGGGATTATT
CTGGCCCGAA CCCTGTTACA AGGCCGCCGT AGCCGTTGGC AGCAATCCCC TTATCTGCTG
ACGGCCAATA TACCGGTTAA AGAAGAAGAT GAAAGCGAAG ATGACACGCC AGAAGCCCTC
GTCGGTCAGG CGGAAACCGA CCATAAGCCT GCCGATAAAT AG
|
|---|
| Protein sequence | MARAKLKFRL HRTAIVLICL ALLVLLMQGA SYFSLSHQLA RSEQVEELAQ TLAKQVAFNL
SPIMDSGDDN IDSQKVDAIL QQLTQSSRIL DASVYQIDGT LVASAGENVK VRDRLALDGK
RPGSYFNHQI VEMIAGNSGP SGFLRMTLDT HVLATESKQV DNTTNLLRLM ILVALAVGII
LARTLLQGRR SRWQQSPYLL TANIPVKEED ESEDDTPEAL VGQAETDHKP ADK
|
|---|
| |