| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3551 |
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| Symbol | |
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| ID | 6089438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3909212 |
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| End bp | 3910822 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641598635 |
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| Product | hypothetical protein |
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| Protein accession | YP_001722271 |
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| Protein GI | 170025766 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.178777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAT TTGAACGCCA GATCCGTGCA GCCATTTCCG CAGCACGCAA TGGCGCAAAA
CATGCGGAAC AGTCACTGAC TACACCAATG TGGCAAGCCA AAAGCACCGT AGCCTCATTG
GGTGGGATTG TCCCTAGAAG TGGCTCTTCG TCAACGTCAC AGGCGGAGAA CTATAAGGAA
GGTCTCGCGG ACCAGGCTGC CTCGGGCAAC AACATGGCGC GCACGAGTGC GCCACCGGTC
ACTTTGTATC AGCAACAGCC AAATGCGAAT GACAGCTATC CAAACGGGAA TAACAACAAT
CCAAACGGGG ATAACAACAA TCCAAACGGG AGTAACAACA ATATAGCGAG AGTACAGCGT
ATGCCGCATG GCATTTCCAG GGGCTTATAT GAGCGCCCTG GGATGTTATT GGGTGCCTGG
GATAACGCCT ATATTGCTGC GGCTATGCCT TTGCTGCTGC TGGTGGAAAA TATTCGTAGC
TGGCCGACGC GTAACGCCGC AGAGGTCAGG CCACCGATTG TGCGGGAATT ACAATATTTC
CAGCAACATT TGCAGAAAAA GAACTACCCG CAAGAAGACA TTAACCACCT GTCTTACCTG
CTATGTACCT ATATCGATGG CATTTTTAAC GGGCTGCAAA CCCCAGGCTC CTACAACCAA
AGTCTGTTAG TGGAGTTTCA CCGTGATGCC TGGGGGGGTG AGGACTGCTT CGAACATCTG
CGGGTCTATA TGAACTCGCC GAAACAGTAC CGGGAAGTTC TGGAATTCTA TGATCTGATT
ATGTGCCTTG GTTTTGACGG TAAATACCAG ATGATAGAGC ATGGTGCGGT TCTGCTGATG
GATTTACGCA GCCGTCTCCA CACGCAACTC TACGGTCAGG ACGCCACACA ATCTTTGGCT
ATCGCGCAAG CGGTCAAAGG TTCTCCGCGT CGCCAATATA TCAAGGCGCT GAAAATCTTC
ACCTATGGTT TCGCACTGTG CCTTTGTGCT TACGGCGTCA CGGCGTGGTA TCTGCACCAG
CAATCCCAAC AGATCCGCAG CAACATTCTG ACGTGGGTAC TGCCTGAACC GCGGAAAATC
AACATCATGG AGACCTTGCC GAATCCGCTA TCCAACATCC TGAATGAAGG GTGGCTGGAG
GTCAGGAAAG ATCCGCGTGG ATGGCTATTA ATCTTCACCT CCGACGGCGC GTTCCGCACG
GGTGAAGCGA CCCTCTCGGA AGAGTTTATC AACAAGAAGA ATATCGAACG TCTTGGGCTG
GCATTAGCCC CATGGCCGGG AGATATCGAG GTTATTGGTC ATACGGATAA CAAACCGTTC
CGTAGCACTT CCGGTAACAA CAACCTCAAA CTTTCCGCGG CCAGAGCATC GGTGGTGGCA
GATAAACTGC GGGAATCCAC TCAAATCAAC GAAACCCATC AGCGAGAAAT AAGTGCCATC
GGACGGGGGG AGAGCGATCC TTTAGCTGAC AATGCAACGG AAGAAGGGCG CAAGCGTAAC
CGGCGTGTGG ATATCCTATG GAAAATTGGT CAGCGCGATG CCGATAAGGC CATGAAGCAA
TTCCTGGAGA ACCCAACACC AGAAGTTCAA GGAACGAATA CCCAACAATA G
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| Protein sequence | MNEFERQIRA AISAARNGAK HAEQSLTTPM WQAKSTVASL GGIVPRSGSS STSQAENYKE
GLADQAASGN NMARTSAPPV TLYQQQPNAN DSYPNGNNNN PNGDNNNPNG SNNNIARVQR
MPHGISRGLY ERPGMLLGAW DNAYIAAAMP LLLLVENIRS WPTRNAAEVR PPIVRELQYF
QQHLQKKNYP QEDINHLSYL LCTYIDGIFN GLQTPGSYNQ SLLVEFHRDA WGGEDCFEHL
RVYMNSPKQY REVLEFYDLI MCLGFDGKYQ MIEHGAVLLM DLRSRLHTQL YGQDATQSLA
IAQAVKGSPR RQYIKALKIF TYGFALCLCA YGVTAWYLHQ QSQQIRSNIL TWVLPEPRKI
NIMETLPNPL SNILNEGWLE VRKDPRGWLL IFTSDGAFRT GEATLSEEFI NKKNIERLGL
ALAPWPGDIE VIGHTDNKPF RSTSGNNNLK LSAARASVVA DKLRESTQIN ETHQREISAI
GRGESDPLAD NATEEGRKRN RRVDILWKIG QRDADKAMKQ FLENPTPEVQ GTNTQQ
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