Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3466 |
Symbol | |
ID | 6088621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3808661 |
End bp | 3809236 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641598550 |
Product | 2'-5' RNA ligase |
Protein accession | YP_001722186 |
Protein GI | 170025681 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATA CCGTTGACGA ATTAAAACGT GTCCGCCGCC TATTCTTTGC CCTGACACTG CCGGATGCCA TGCAACAAGA GATTGTGCAA TGGCGAGCTG GTCATTTCTC GCCAGAGGCG GGTCGCCCTG TCGCGGCGGC GAATCTGCAC CTGACACTGG CGTTCCTTGG TGAAGTCAGT GCGACAAAAG CCCAGGTGTT ACAGCAGCAA GCCGGGCGTA TCCAACAAGC AGGTTTCAGC GTGACATTAG ATGATATCGG CCATTGGCCC GGTTCCGGCG TGATTTGGCT GGGATGTAAG AACCCCCCTC GTGGCCTGTT GCAATTGGCG CAGTTGCTGC GCTCCCAGGC AGCACGTAGT GGCTGTTATC AAACGCCGCT GCCGTTTCAT CCCCATGTTA CTCTGTTGCG TAACGCAACC CGCCCAGTGG CATTACCTGC CAAGAGCGGC AATGAGACCT TCCAGGCGGA CCATTTCTCG CTGTATGAAT CGGTCTTCGC GCGGGGCCGC ACCCGCTATA ACATCGTACA AAGCTGGCCG CTGGCTGGCA GTGAAAGGAA ACCAGATGCC TGCTAA
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Protein sequence | MTNTVDELKR VRRLFFALTL PDAMQQEIVQ WRAGHFSPEA GRPVAAANLH LTLAFLGEVS ATKAQVLQQQ AGRIQQAGFS VTLDDIGHWP GSGVIWLGCK NPPRGLLQLA QLLRSQAARS GCYQTPLPFH PHVTLLRNAT RPVALPAKSG NETFQADHFS LYESVFARGR TRYNIVQSWP LAGSERKPDA C
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