Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3451 |
Symbol | |
ID | 6087425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3786433 |
End bp | 3789261 |
Gene Length | 2829 bp |
Protein Length | 942 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641598535 |
Product | hybrid sensory histidine kinase BarA |
Protein accession | YP_001722171 |
Protein GI | 170025666 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver [COG4999] Uncharacterized domain of BarA-like signal transduction histidine kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0803484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAT ACAGTCTTCG CGCGCGCATG ATGATTTTAA TCTTGGCACC CACGCTGCTT CTAGGGCTGT TACTCAGTAC ATCCTTTATG GTCAATCGCT ATAATGAGCT GCAAAACCAA ATAGTTAGTG CCGGCACCAA TATTATTGAA CCGTTGGCCG TTGCCAGTGA ATACGGGATG AGCTTCCGCA ACCGCGACAC CGTTCGACAG TTGATTAATC TACTACACCG AAGGCACTCG AATATTGTTC GGTCAATTTC TGTTTTTGAC GTAGATAATA AGCTTTTTGT CACATCCAAC TACAATTACA ATTCCTCACA ATTAAGACTC CCTCCAGGCG AACCCGTCCC CGATTCTTTG ATGCTTTCGT ACCGTGGGGA TTCGCTGATC CTACGAATGC CCATTGTCTC TGAATCTAAT TTATCCAGTG AACAAGCCTC CGGGCAGGGG GAAAGTGACC AGATACTGGG CTATATCGCC ATTGATTTAG ATTTACAATC AGTGCGCCTG AAACAATATA AAGAAATATT CATTTCAACT TTGCTACTGC TGTTCTGTAT GTGTGTCGCC ATTTTGTTTG CTTACCGCCT GATGCGAGAT GTCACCGGCC CTATCCGCAA TATGGTCAAT ACCGTCGACC GTATTCGCCG CGGGCAATTA GACAGCCGGG TTGAAGGCCA TATGCTCGGG GAGTTGAATA TTCTTAAAAA TGGTATCAAT TCAATGGCGA TGTCACTCGC GGCCTATCAT GAAGAGATGC AGCAGAATAT TGATCAAGCG ACATCGGACT TACGCGAAAC ACTCGAACAA ATGGAAATCC AGAATGTGGA ATTGGGGCTG GCGAAAAAGC GTGCTCAAGA AGCCTCTCGA ATTAAATCGG AGTTCCTAGC CAATATGTCC CATGAGCTGC GTACACCACT CAATGGGGTG ATTGGTTTTA CCCGACAAAC ACTGAAAACC TCGCTGACAC CGACACAAAC TGACTATTTA CAAACCATCC AGCGTTCGGC CAACAACCTG TTATGCATCA TTAACGATGT CCTGGATTTC TCCAAACTGG AAGCCGATAA ACTGATACTT GAGCATATTC CCTTTTCGCT ACGTGGAACG TTAGATGAAG TCATTATTTT GCTGGCACAT ACCGCCCATG AAAAAGGGCT AGAGCTGACG TTACATATCA ATAATGACGT GCCAGACCAA GTGTTAGGCG ATGCCATGCG TTTGCAGCAA ATCGTCACTA ACTTGCTGGG TAATGCGATT AAATTCACCG AAGAGGGCAA TATTGACATT CTGGTCGTCG TGAAGGCTAT CGCATCACAG CAAGTGACAT TGATGGTAGA GATCCACGAT ACCGGTATCG GTATTTCTGA ATCCCAGCAA GCGCAGTTAT TCCAGGCTTT CCGTCAGGCG GATGCCAGTA CCTCTCTACG CCATGGAGGT ACTGGGCTTG GCCTGGTGAT TACCGAACGG TTAGTGAAAG AAATGGGCGG TAATATCAGT TTCCAAAGCC AAATGAGTTG CGGTTCAATC TTCAGATTTC ACCTCACATT AGAACTTAAC GAGAGTATCC CTTACCGCCA ACCTGATATG GCGCATTTAG AGGGGAAACA ACTGGCTTAT ATTGAGCGTA ATTCTACGGC GGCGAGAGCG ACGATAAATA TACTCAACAC CACGCCATTG CAGGTGACTC ATCGTCAGTC TTTAGCTCAG TTACCTGAAC AACATTATGA TTTCCTGCTG GTCGGGGTAC CGATCCCATT TAGAAATAAC ATGGCAATTC ATCAAGATAA ATTGCTAACA GCCCTAAAAA TTGCCGACCA TGTCATCTTG GCACTACCAA GCCAATCGCA AGTAGAAGCC GAGCAACTTA AGCAAATCGG AGCCAAAGGT TGCCTGCTGA AACCCATATC GTCTATCAGG CTTATCCCTT TACTCTTGGC CGAAGACACG CATAGTAAAG TACCATCAGA GGAGCAACCA CGTAAGCAAC CAAAGTTACC TTTCAGGGTG ATGGCTGTCG ACGATAACCC TGCGAATCTG AAGCTAATAG GTACCCTGCT TGAAGAGCAA ATTGAGGAAA CGGTACTGTG CGACAGCGGT GCCATGGCGA TCACCTATGC GCGTGAGCAC ACGCTGGATA TCATTTTAAT GGATATTCAA ATGCCAGAAA TCGATGGTAT CCGTGCCAGT GAAATTATTC ACCAGATACC GCATCACCAA GAGACACCAA TCATTGCGGT CACCGCCCAT GCCGTTAAAG GCCAGCAAGA GCAATTGTTA AGATTGGGTA TGGCAGATTA TCTGGCAAAG CCTATTGATG AAGCACGGCT GCTACAGGTA CTCTCCCGCT ATCAAAGCGA TAATCCGCCA TTATCTACAG CATCTACAGC ATCTACAGCA TCTACAGCAT CTACAGCATC TACAGCATCT ACAGCATCTA CAGCATCTAC AGCAGAAAGC CTGCCACTTC CCGTGCCTAA AGGTGCTGGG GTCATAGATT GGGCACAGGC TGTCAGGCAA GCCGCCAATA AAGAGGATCT GGCACGGGAT CTCTTAACCA TGTTGCTAGA ATTTATGCCG CAGATTACCG CCCGTGTGCA GGCGATTCTG GCAGGGGCTG ACGATGGCGA CATTCTGAAT TTGGTGCATA AATTCCATGG CAGTTGCGCC TGTAGCGGTG TGCCACGCCT CAGACAACTG TGCATGACCA TTGAACTACA GTTGCGCCAG CAGGTTAATT TGCAGGATTT AGAACCCGAG TGGCTTGAGT TGCTGGATGA GATAGAAAAT GTCAGCGAAG CGGCTAAAAC CTATTTACGT ACAGAGTGA
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Protein sequence | MTKYSLRARM MILILAPTLL LGLLLSTSFM VNRYNELQNQ IVSAGTNIIE PLAVASEYGM SFRNRDTVRQ LINLLHRRHS NIVRSISVFD VDNKLFVTSN YNYNSSQLRL PPGEPVPDSL MLSYRGDSLI LRMPIVSESN LSSEQASGQG ESDQILGYIA IDLDLQSVRL KQYKEIFIST LLLLFCMCVA ILFAYRLMRD VTGPIRNMVN TVDRIRRGQL DSRVEGHMLG ELNILKNGIN SMAMSLAAYH EEMQQNIDQA TSDLRETLEQ MEIQNVELGL AKKRAQEASR IKSEFLANMS HELRTPLNGV IGFTRQTLKT SLTPTQTDYL QTIQRSANNL LCIINDVLDF SKLEADKLIL EHIPFSLRGT LDEVIILLAH TAHEKGLELT LHINNDVPDQ VLGDAMRLQQ IVTNLLGNAI KFTEEGNIDI LVVVKAIASQ QVTLMVEIHD TGIGISESQQ AQLFQAFRQA DASTSLRHGG TGLGLVITER LVKEMGGNIS FQSQMSCGSI FRFHLTLELN ESIPYRQPDM AHLEGKQLAY IERNSTAARA TINILNTTPL QVTHRQSLAQ LPEQHYDFLL VGVPIPFRNN MAIHQDKLLT ALKIADHVIL ALPSQSQVEA EQLKQIGAKG CLLKPISSIR LIPLLLAEDT HSKVPSEEQP RKQPKLPFRV MAVDDNPANL KLIGTLLEEQ IEETVLCDSG AMAITYAREH TLDIILMDIQ MPEIDGIRAS EIIHQIPHHQ ETPIIAVTAH AVKGQQEQLL RLGMADYLAK PIDEARLLQV LSRYQSDNPP LSTASTASTA STASTASTAS TASTASTAES LPLPVPKGAG VIDWAQAVRQ AANKEDLARD LLTMLLEFMP QITARVQAIL AGADDGDILN LVHKFHGSCA CSGVPRLRQL CMTIELQLRQ QVNLQDLEPE WLELLDEIEN VSEAAKTYLR TE
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