| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3417 |
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| Symbol | |
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| ID | 6089943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3749742 |
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| End bp | 3750713 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641598501 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001722137 |
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| Protein GI | 170025632 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.330791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGC AGATGATCCC ACAAGACAAT GAGTTGTTAA CTGAAATTGC TGTTTCGTAT
TATCAGGATG AAATGACTCA GGAAGAAATC GCCCATAAAT TTGGCATTTC AAGGATCAAA
GTCGGTCGCT TGCTGAAACG CGCGAAAACA GAGGGCATCG TTGAGATTAA CGTTCGTTAT
CATCCGGTAT TCAGTACCCG CCTTGAGCAA CAGTTAATCG AGCATTTTGG GTTGAAACGG
GCGCTGATAG CCCTTGATTA CCAAGATGAG GATGAACAAC GCCGCCAGGT CGCCGCGTTG
GTTTCAGCCT ACTTAGCCAC AAACTTAAAA GACAACACGG TGTTGGCCGT TGGCCAGGGG
CGTAATGTTG CGGCTATCGC AGACCACGTC AGCGTCGTGC CAGAAAGGCA CTGTAAGTTT
ATCTGTGGCA TCGGTGGAAC ACACCGCCCA GGTGATGCGA TTAATGCCGA TCACATCAGT
CGCCGCTTAG CCAAAAAATT TGGCGGAACG AGTGAAACCC TGTACGCACC CGCGTATGTG
GAAAACCGGG CGCTAAAAGA AGCCTTTATG CAAAACGGTA CCATTAAAGA GACTCTGGAT
CGCGCCCGTA AGGCTGATAT GGCTCTGGTT GGCATCGGTG ATATGAACGA AAACAGCTAT
ATGGTAGAGC TGGGCTGGTT CACTCCTCAG GAGATCGTCG ACGCCAGTCT GCATCAAGGT
GTGACAGGCG AAATTGCGGG ATATGATTTT TTTGATGCGC AAGGCCAACC CGCGAATACG
GTGATGAATG ATCGGGTTAT TGGTATCAGC ACCCAAGAGC TTCGCCAGAT CCCCTGCGTT
ATCGCTATCG CCGCTGAAAA CACCAAAGCA TTAGCGCTGC TGGGTGCCTT GCGTACCGGT
GCGATCGATA TTCTTGCGAC CAGTGCATCC AATGCCCGGA CTATTTTGAA GATGATTCAA
CATCAGTCGT AA
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| Protein sequence | MEKQMIPQDN ELLTEIAVSY YQDEMTQEEI AHKFGISRIK VGRLLKRAKT EGIVEINVRY
HPVFSTRLEQ QLIEHFGLKR ALIALDYQDE DEQRRQVAAL VSAYLATNLK DNTVLAVGQG
RNVAAIADHV SVVPERHCKF ICGIGGTHRP GDAINADHIS RRLAKKFGGT SETLYAPAYV
ENRALKEAFM QNGTIKETLD RARKADMALV GIGDMNENSY MVELGWFTPQ EIVDASLHQG
VTGEIAGYDF FDAQGQPANT VMNDRVIGIS TQELRQIPCV IAIAAENTKA LALLGALRTG
AIDILATSAS NARTILKMIQ HQS
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